Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 AP002383.4-201ENST00000442518 975 ntBASIC16.72■□□□□ 0.27
RTL4Q6ZR62 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 AC113404.2-201ENST00000507884 177 ntBASIC16.72■□□□□ 0.27
RTL4Q6ZR62 GUSBP12-201ENST00000513727 720 ntBASIC16.72■□□□□ 0.27
RTL4Q6ZR62 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 IGHV3-41-201ENST00000613121 348 ntBASIC16.72■□□□□ 0.27
RTL4Q6ZR62 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 AL024508.2-201ENST00000607749 1894 ntBASIC16.71■□□□□ 0.27
RTL4Q6ZR62 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 AC004263.2-201ENST00000617183 678 ntBASIC16.71■□□□□ 0.27
RTL4Q6ZR62 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 AC008764.6-201ENST00000595909 2069 ntBASIC16.71■□□□□ 0.27
RTL4Q6ZR62 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL4Q6ZR62 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RTL4Q6ZR62 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.71■□□□□ 0.26
RTL4Q6ZR62 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.71■□□□□ 0.26
RTL4Q6ZR62 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 OR6D1P-203ENST00000641209 4860 ntBASIC16.7■□□□□ 0.26
RTL4Q6ZR62 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.7■□□□□ 0.26
RTL4Q6ZR62 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 SLC25A6P5-201ENST00000435663 894 ntBASIC16.7■□□□□ 0.26
RTL4Q6ZR62 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 MIR3180-1-201ENST00000580374 94 ntBASIC16.7■□□□□ 0.26
RTL4Q6ZR62 MIR3180-3-201ENST00000584616 94 ntBASIC16.7■□□□□ 0.26
RTL4Q6ZR62 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms