Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC005336.2-201ENST00000593183 939 ntBASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 AC008764.6-201ENST00000595909 2069 ntBASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 PRORSD1P-202ENST00000563365 2154 ntBASIC18.57■□□□□ 0.56
RFWD3Q6PCD5 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFWD3Q6PCD5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 REXO1L9P-201ENST00000604264 2108 ntBASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.55■□□□□ 0.56
RFWD3Q6PCD5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 TSPY19P-201ENST00000418461 509 ntBASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 TSPY18P-201ENST00000441642 509 ntBASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 AC112698.1-201ENST00000510299 916 ntBASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.54■□□□□ 0.56
RFWD3Q6PCD5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms