Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HIST2H2AA3Q6FI13 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HIST2H2AA3Q6FI13 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 AC006116.8-202ENST00000587620 1550 ntBASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 AC067852.2-201ENST00000590513 2313 ntBASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 AC012317.2-201ENST00000623305 2251 ntBASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HIST2H2AA3Q6FI13 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 AC100803.2-201ENST00000562459 1963 ntBASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 AL645929.1-201ENST00000420084 975 ntBASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 AC083849.1-201ENST00000615227 514 ntBASIC17.23■□□□□ 0.35
HIST2H2AA3Q6FI13 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms