Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 MIR3652-201ENST00000579335 131 ntBASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 AC233702.3-201ENST00000578656 1387 ntBASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.56■□□□□ 0.56
TTC39BQ5VTQ0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 FLJ13224-201ENST00000313737 1514 ntBASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 FZD10-202ENST00000539839 3282 ntBASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 AC068472.1-201ENST00000474589 881 ntBASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.55■□□□□ 0.56
TTC39BQ5VTQ0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TTC39BQ5VTQ0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms