Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRK2Q5S007 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 AC120498.9-201ENST00000339021 3867 ntBASIC15.32■□□□□ 0.04
LRRK2Q5S007 AL162274.1-201ENST00000617191 1098 ntBASIC15.32■□□□□ 0.04
LRRK2Q5S007 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRRK2Q5S007 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRK2Q5S007 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
LRRK2Q5S007 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRK2Q5S007 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.32■□□□□ 0.04
LRRK2Q5S007 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.32■□□□□ 0.04
LRRK2Q5S007 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRK2Q5S007 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRK2Q5S007 GGTLC5P-201ENST00000617623 998 ntBASIC15.32■□□□□ 0.04
LRRK2Q5S007 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 AL355306.1-201ENST00000415580 579 ntBASIC15.31■□□□□ 0.04
LRRK2Q5S007 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 AC017083.2-201ENST00000608069 979 ntBASIC15.31■□□□□ 0.04
LRRK2Q5S007 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRK2Q5S007 AC092580.3-201ENST00000430932 139 ntBASIC15.31■□□□□ 0.04
LRRK2Q5S007 AC097493.3-201ENST00000509725 367 ntBASIC15.31■□□□□ 0.04
LRRK2Q5S007 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRK2Q5S007 MIR4525-201ENST00000580000 75 ntBASIC15.31■□□□□ 0.04
LRRK2Q5S007 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRK2Q5S007 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LRRK2Q5S007 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 AL032819.2-201ENST00000624543 2162 ntBASIC15.3■□□□□ 0.04
LRRK2Q5S007 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRK2Q5S007 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 AC012676.1-201ENST00000574705 1949 ntBASIC15.3■□□□□ 0.04
LRRK2Q5S007 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRRK2Q5S007 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRK2Q5S007 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
LRRK2Q5S007 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRK2Q5S007 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRK2Q5S007 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 AC004890.2-204ENST00000481968 304 ntBASIC15.3■□□□□ 0.04
LRRK2Q5S007 SLC25A39P2-201ENST00000537614 270 ntBASIC15.3■□□□□ 0.04
LRRK2Q5S007 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRK2Q5S007 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 GABARAPL3-202ENST00000624044 1851 ntBASIC15.3■□□□□ 0.04
LRRK2Q5S007 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
LRRK2Q5S007 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRK2Q5S007 HCG4-201ENST00000418983 998 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms