Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
LONRF3Q496Y0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.27■□□□□ 0.83
LONRF3Q496Y0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LONRF3Q496Y0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LONRF3Q496Y0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
LONRF3Q496Y0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LONRF3Q496Y0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
LONRF3Q496Y0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 KRT126P-201ENST00000549467 1181 ntBASIC20.26■□□□□ 0.83
LONRF3Q496Y0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LONRF3Q496Y0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 AC011498.5-201ENST00000592027 486 ntBASIC20.25■□□□□ 0.83
LONRF3Q496Y0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LONRF3Q496Y0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 AL391807.1-203ENST00000604392 2365 ntBASIC20.24■□□□□ 0.83
LONRF3Q496Y0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 AL136038.4-201ENST00000603606 1261 ntBASIC20.24■□□□□ 0.83
LONRF3Q496Y0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LONRF3Q496Y0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms