Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL16A1Q07092 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL16A1Q07092 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL16A1Q07092 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL16A1Q07092 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
COL16A1Q07092 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL16A1Q07092 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL16A1Q07092 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.79■■□□□ 1.4
COL16A1Q07092 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL16A1Q07092 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC23.79■■□□□ 1.4
COL16A1Q07092 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL16A1Q07092 FAM185BP-201ENST00000443595 716 ntBASIC23.79■■□□□ 1.4
COL16A1Q07092 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC23.79■■□□□ 1.4
COL16A1Q07092 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC23.79■■□□□ 1.4
COL16A1Q07092 THTPA-204ENST00000554970 569 ntTSL 4 BASIC23.79■■□□□ 1.4
COL16A1Q07092 THTPA-206ENST00000556015 535 ntTSL 3 BASIC23.79■■□□□ 1.4
COL16A1Q07092 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
COL16A1Q07092 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC23.79■■□□□ 1.4
COL16A1Q07092 STK25P1-201ENST00000585406 838 ntBASIC23.79■■□□□ 1.4
COL16A1Q07092 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL16A1Q07092 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL16A1Q07092 AC009336.1-201ENST00000608941 1553 ntBASIC23.79■■□□□ 1.4
COL16A1Q07092 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.79■■□□□ 1.4
COL16A1Q07092 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL16A1Q07092 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
COL16A1Q07092 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
COL16A1Q07092 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC23.78■■□□□ 1.4
COL16A1Q07092 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL16A1Q07092 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL16A1Q07092 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL16A1Q07092 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC23.78■■□□□ 1.4
COL16A1Q07092 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
COL16A1Q07092 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC23.78■■□□□ 1.4
COL16A1Q07092 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC23.78■■□□□ 1.4
COL16A1Q07092 AC009118.2-201ENST00000613275 655 ntBASIC23.78■■□□□ 1.4
COL16A1Q07092 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL16A1Q07092 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL16A1Q07092 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL16A1Q07092 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL16A1Q07092 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL16A1Q07092 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL16A1Q07092 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL16A1Q07092 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL16A1Q07092 KRT17P7-201ENST00000451704 1104 ntBASIC23.77■■□□□ 1.4
COL16A1Q07092 TMPRSS11CP-201ENST00000453277 683 ntBASIC23.77■■□□□ 1.4
COL16A1Q07092 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC23.77■■□□□ 1.4
COL16A1Q07092 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC23.77■■□□□ 1.4
COL16A1Q07092 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC23.77■■□□□ 1.4
COL16A1Q07092 RARRES2P8-201ENST00000566335 367 ntBASIC23.77■■□□□ 1.4
COL16A1Q07092 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL16A1Q07092 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL16A1Q07092 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL16A1Q07092 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.77■■□□□ 1.4
COL16A1Q07092 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
COL16A1Q07092 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.77■■□□□ 1.4
COL16A1Q07092 AL137060.1-201ENST00000618151 2648 ntBASIC23.77■■□□□ 1.4
COL16A1Q07092 AL590787.1-201ENST00000568856 1315 ntBASIC23.77■■□□□ 1.4
COL16A1Q07092 STK19B-204ENST00000512515 211 ntBASIC23.77■■□□□ 1.4
COL16A1Q07092 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC23.77■■□□□ 1.4
COL16A1Q07092 MIR6080-201ENST00000617359 66 ntBASIC23.77■■□□□ 1.4
COL16A1Q07092 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL16A1Q07092 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.39
COL16A1Q07092 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL16A1Q07092 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.76■■□□□ 1.39
COL16A1Q07092 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL16A1Q07092 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL16A1Q07092 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL16A1Q07092 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL16A1Q07092 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.76■■□□□ 1.39
COL16A1Q07092 AL158211.5-201ENST00000623583 2518 ntBASIC23.76■■□□□ 1.39
COL16A1Q07092 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC23.76■■□□□ 1.39
COL16A1Q07092 CD81-202ENST00000381036 880 ntTSL 3 BASIC23.76■■□□□ 1.39
COL16A1Q07092 AC079776.1-201ENST00000401540 1152 ntBASIC23.76■■□□□ 1.39
COL16A1Q07092 AL671277.1-201ENST00000429656 993 ntBASIC23.76■■□□□ 1.39
COL16A1Q07092 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC23.76■■□□□ 1.39
COL16A1Q07092 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC23.76■■□□□ 1.39
COL16A1Q07092 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC23.76■■□□□ 1.39
COL16A1Q07092 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC23.76■■□□□ 1.39
COL16A1Q07092 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
COL16A1Q07092 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.75■■□□□ 1.39
COL16A1Q07092 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL16A1Q07092 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL16A1Q07092 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL16A1Q07092 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL16A1Q07092 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC23.75■■□□□ 1.39
COL16A1Q07092 PGF-202ENST00000405431 666 ntTSL 5 BASIC23.75■■□□□ 1.39
COL16A1Q07092 MIR1909-201ENST00000411312 80 ntBASIC23.75■■□□□ 1.39
COL16A1Q07092 TSSK5P-201ENST00000423978 907 ntBASIC23.75■■□□□ 1.39
COL16A1Q07092 SPCS2P4-201ENST00000436160 681 ntBASIC23.75■■□□□ 1.39
COL16A1Q07092 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
COL16A1Q07092 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC23.75■■□□□ 1.39
COL16A1Q07092 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC23.75■■□□□ 1.39
COL16A1Q07092 IGHV3-72-202ENST00000621503 303 ntBASIC23.75■■□□□ 1.39
COL16A1Q07092 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC23.75■■□□□ 1.39
COL16A1Q07092 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL16A1Q07092 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
COL16A1Q07092 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL16A1Q07092 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL16A1Q07092 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
COL16A1Q07092 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms