Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
PRAMEP78395 AC100803.2-201ENST00000562459 1963 ntBASIC18■□□□□ 0.47
PRAMEP78395 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
PRAMEP78395 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18■□□□□ 0.47
PRAMEP78395 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18■□□□□ 0.47
PRAMEP78395 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18■□□□□ 0.47
PRAMEP78395 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18■□□□□ 0.47
PRAMEP78395 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18■□□□□ 0.47
PRAMEP78395 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PRAMEP78395 AC104076.2-201ENST00000448912 469 ntBASIC18■□□□□ 0.47
PRAMEP78395 AP003733.1-201ENST00000491725 852 ntBASIC18■□□□□ 0.47
PRAMEP78395 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18■□□□□ 0.47
PRAMEP78395 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18■□□□□ 0.47
PRAMEP78395 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18■□□□□ 0.47
PRAMEP78395 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18■□□□□ 0.47
PRAMEP78395 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18■□□□□ 0.47
PRAMEP78395 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18■□□□□ 0.47
PRAMEP78395 AC139713.2-201ENST00000641328 2723 ntBASIC18■□□□□ 0.47
PRAMEP78395 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PRAMEP78395 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18■□□□□ 0.47
PRAMEP78395 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PRAMEP78395 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18■□□□□ 0.47
PRAMEP78395 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PRAMEP78395 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRAMEP78395 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.99■□□□□ 0.47
PRAMEP78395 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.99■□□□□ 0.47
PRAMEP78395 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PRAMEP78395 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.99■□□□□ 0.47
PRAMEP78395 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PRAMEP78395 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 HBZP1-201ENST00000354915 429 ntBASIC17.99■□□□□ 0.47
PRAMEP78395 RCN1P1-201ENST00000400413 996 ntBASIC17.99■□□□□ 0.47
PRAMEP78395 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.99■□□□□ 0.47
PRAMEP78395 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.99■□□□□ 0.47
PRAMEP78395 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 KRT18P65-201ENST00000439811 1286 ntBASIC17.99■□□□□ 0.47
PRAMEP78395 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.99■□□□□ 0.47
PRAMEP78395 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.99■□□□□ 0.47
PRAMEP78395 LINC01238-205ENST00000567549 1107 ntBASIC17.99■□□□□ 0.47
PRAMEP78395 AC004263.2-201ENST00000617183 678 ntBASIC17.99■□□□□ 0.47
PRAMEP78395 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.99■□□□□ 0.47
PRAMEP78395 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PRAMEP78395 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
PRAMEP78395 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.99■□□□□ 0.47
PRAMEP78395 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.99■□□□□ 0.47
PRAMEP78395 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.99■□□□□ 0.47
PRAMEP78395 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRAMEP78395 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PRAMEP78395 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PRAMEP78395 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.98■□□□□ 0.47
PRAMEP78395 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 TMPOP1-202ENST00000424642 1267 ntBASIC17.98■□□□□ 0.47
PRAMEP78395 AC063952.2-201ENST00000498792 1227 ntBASIC17.98■□□□□ 0.47
PRAMEP78395 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.98■□□□□ 0.47
PRAMEP78395 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.98■□□□□ 0.47
PRAMEP78395 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.98■□□□□ 0.47
PRAMEP78395 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.98■□□□□ 0.47
PRAMEP78395 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRAMEP78395 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms