Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TPM4P67936 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
TPM4P67936 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 CRYGFP-201ENST00000418459 633 ntBASIC19.99■□□□□ 0.79
TPM4P67936 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.99■□□□□ 0.79
TPM4P67936 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TPM4P67936 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.99■□□□□ 0.79
TPM4P67936 AC116562.2-201ENST00000507042 360 ntBASIC19.99■□□□□ 0.79
TPM4P67936 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.99■□□□□ 0.79
TPM4P67936 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.99■□□□□ 0.79
TPM4P67936 AC116407.2-201ENST00000613639 860 ntBASIC19.99■□□□□ 0.79
TPM4P67936 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TPM4P67936 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TPM4P67936 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
TPM4P67936 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.99■□□□□ 0.79
TPM4P67936 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
TPM4P67936 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.99■□□□□ 0.79
TPM4P67936 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.98■□□□□ 0.79
TPM4P67936 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM4P67936 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM4P67936 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM4P67936 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM4P67936 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM4P67936 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.98■□□□□ 0.79
TPM4P67936 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM4P67936 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TPM4P67936 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM4P67936 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM4P67936 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.98■□□□□ 0.79
TPM4P67936 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM4P67936 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM4P67936 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.98■□□□□ 0.79
TPM4P67936 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TPM4P67936 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.98■□□□□ 0.79
TPM4P67936 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM4P67936 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.98■□□□□ 0.79
TPM4P67936 AC008687.5-201ENST00000593746 558 ntBASIC19.98■□□□□ 0.79
TPM4P67936 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
TPM4P67936 AC112497.1-201ENST00000624824 639 ntBASIC19.98■□□□□ 0.79
TPM4P67936 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.98■□□□□ 0.79
TPM4P67936 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TPM4P67936 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
TPM4P67936 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM4P67936 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM4P67936 HLA-J-201ENST00000462773 1622 ntBASIC19.98■□□□□ 0.79
TPM4P67936 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM4P67936 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TPM4P67936 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.97■□□□□ 0.79
TPM4P67936 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TPM4P67936 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
TPM4P67936 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.97■□□□□ 0.79
TPM4P67936 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM4P67936 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TPM4P67936 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TPM4P67936 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
TPM4P67936 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM4P67936 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM4P67936 NUDT16P1-203ENST00000513809 620 ntBASIC19.97■□□□□ 0.79
TPM4P67936 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.97■□□□□ 0.79
TPM4P67936 AC104390.1-201ENST00000555663 520 ntBASIC19.97■□□□□ 0.79
TPM4P67936 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM4P67936 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM4P67936 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.97■□□□□ 0.79
TPM4P67936 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.97■□□□□ 0.79
TPM4P67936 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TPM4P67936 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TPM4P67936 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.97■□□□□ 0.79
TPM4P67936 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.96■□□□□ 0.79
TPM4P67936 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms