Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SUMO3P55854 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SUMO3P55854 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.13■□□□□ 0.17
SUMO3P55854 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.13■□□□□ 0.17
SUMO3P55854 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SUMO3P55854 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SUMO3P55854 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SUMO3P55854 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.13■□□□□ 0.17
SUMO3P55854 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SUMO3P55854 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.13■□□□□ 0.17
SUMO3P55854 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.13■□□□□ 0.17
SUMO3P55854 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SUMO3P55854 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.13■□□□□ 0.17
SUMO3P55854 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SUMO3P55854 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.13■□□□□ 0.17
SUMO3P55854 AP005901.3-202ENST00000581653 237 ntBASIC16.13■□□□□ 0.17
SUMO3P55854 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SUMO3P55854 AC092119.3-201ENST00000612618 583 ntBASIC16.13■□□□□ 0.17
SUMO3P55854 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.13■□□□□ 0.17
SUMO3P55854 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SUMO3P55854 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SUMO3P55854 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SUMO3P55854 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SUMO3P55854 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.13■□□□□ 0.17
SUMO3P55854 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SUMO3P55854 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SUMO3P55854 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SUMO3P55854 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.13■□□□□ 0.17
SUMO3P55854 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SUMO3P55854 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.13■□□□□ 0.17
SUMO3P55854 AC012317.2-201ENST00000623305 2251 ntBASIC16.12■□□□□ 0.17
SUMO3P55854 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SUMO3P55854 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.12■□□□□ 0.17
SUMO3P55854 AC133963.1-201ENST00000504166 1679 ntBASIC16.12■□□□□ 0.17
SUMO3P55854 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.12■□□□□ 0.17
SUMO3P55854 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SUMO3P55854 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.12■□□□□ 0.17
SUMO3P55854 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 IGHV3-47-201ENST00000425060 335 ntBASIC16.12■□□□□ 0.17
SUMO3P55854 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.12■□□□□ 0.17
SUMO3P55854 MINOS1P3-201ENST00000457048 203 ntBASIC16.12■□□□□ 0.17
SUMO3P55854 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.12■□□□□ 0.17
SUMO3P55854 AC002558.1-201ENST00000488906 803 ntBASIC16.12■□□□□ 0.17
SUMO3P55854 AC091607.1-201ENST00000490318 1060 ntBASIC16.12■□□□□ 0.17
SUMO3P55854 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.12■□□□□ 0.17
SUMO3P55854 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.12■□□□□ 0.17
SUMO3P55854 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SUMO3P55854 AC011467.2-201ENST00000598425 242 ntBASIC16.12■□□□□ 0.17
SUMO3P55854 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SUMO3P55854 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SUMO3P55854 NSUN5P1-202ENST00000421140 1535 ntBASIC16.12■□□□□ 0.17
SUMO3P55854 NSUN5P2-203ENST00000457352 1529 ntBASIC16.12■□□□□ 0.17
SUMO3P55854 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.12■□□□□ 0.17
SUMO3P55854 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.12■□□□□ 0.17
SUMO3P55854 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SUMO3P55854 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.12■□□□□ 0.17
SUMO3P55854 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 AC010460.3-201ENST00000511359 1579 ntBASIC16.12■□□□□ 0.17
SUMO3P55854 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.12■□□□□ 0.17
SUMO3P55854 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.12■□□□□ 0.17
SUMO3P55854 HLA-J-201ENST00000462773 1622 ntBASIC16.12■□□□□ 0.17
SUMO3P55854 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.12■□□□□ 0.17
SUMO3P55854 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SUMO3P55854 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.11■□□□□ 0.17
SUMO3P55854 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.11■□□□□ 0.17
SUMO3P55854 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.11■□□□□ 0.17
SUMO3P55854 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SUMO3P55854 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.11■□□□□ 0.17
SUMO3P55854 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SUMO3P55854 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SUMO3P55854 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SUMO3P55854 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SUMO3P55854 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SUMO3P55854 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SUMO3P55854 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.11■□□□□ 0.17
SUMO3P55854 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SUMO3P55854 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SUMO3P55854 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.11■□□□□ 0.17
SUMO3P55854 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
SUMO3P55854 POM121L3P-201ENST00000419331 1163 ntBASIC16.11■□□□□ 0.17
SUMO3P55854 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SUMO3P55854 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SUMO3P55854 AP000867.3-201ENST00000524675 377 ntBASIC16.11■□□□□ 0.17
SUMO3P55854 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SUMO3P55854 AC074051.2-201ENST00000565115 352 ntBASIC16.11■□□□□ 0.17
SUMO3P55854 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms