Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDH12P55289 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH12P55289 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 AC009947.2-201ENST00000444014 672 ntBASIC16.63■□□□□ 0.25
CDH12P55289 ECEL1P2-202ENST00000465689 757 ntBASIC16.63■□□□□ 0.25
CDH12P55289 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH12P55289 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
CDH12P55289 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH12P55289 AC024243.1-201ENST00000609234 778 ntBASIC16.63■□□□□ 0.25
CDH12P55289 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
CDH12P55289 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDH12P55289 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CDH12P55289 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDH12P55289 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH12P55289 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CDH12P55289 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH12P55289 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDH12P55289 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH12P55289 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH12P55289 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDH12P55289 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDH12P55289 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH12P55289 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.62■□□□□ 0.25
CDH12P55289 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.62■□□□□ 0.25
CDH12P55289 SEC1P-202ENST00000473944 940 ntBASIC16.62■□□□□ 0.25
CDH12P55289 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH12P55289 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH12P55289 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH12P55289 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH12P55289 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH12P55289 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH12P55289 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH12P55289 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDH12P55289 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 AC133963.1-201ENST00000504166 1679 ntBASIC16.62■□□□□ 0.25
CDH12P55289 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDH12P55289 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH12P55289 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH12P55289 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDH12P55289 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CDH12P55289 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDH12P55289 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH12P55289 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 AL138688.1-201ENST00000624851 1594 ntBASIC16.61■□□□□ 0.25
CDH12P55289 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH12P55289 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CDH12P55289 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH12P55289 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 DUTP2-201ENST00000519164 463 ntBASIC16.61■□□□□ 0.25
CDH12P55289 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH12P55289 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH12P55289 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH12P55289 CROCCP2-202ENST00000412962 2773 ntBASIC16.61■□□□□ 0.25
CDH12P55289 AC132938.6-201ENST00000623828 1655 ntBASIC16.61■□□□□ 0.25
CDH12P55289 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH12P55289 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH12P55289 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CDH12P55289 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDH12P55289 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH12P55289 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CDH12P55289 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH12P55289 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH12P55289 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms