Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH6P55285 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH6P55285 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH6P55285 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.56■□□□□ 0.56
CDH6P55285 AL390719.2-201ENST00000606993 987 ntBASIC18.56■□□□□ 0.56
CDH6P55285 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CDH6P55285 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH6P55285 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.56■□□□□ 0.56
CDH6P55285 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH6P55285 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH6P55285 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH6P55285 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH6P55285 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CDH6P55285 PKD1P1-201ENST00000458669 6805 ntBASIC18.56■□□□□ 0.56
CDH6P55285 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH6P55285 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH6P55285 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDH6P55285 Z83836.1-201ENST00000624605 1642 ntBASIC18.56■□□□□ 0.56
CDH6P55285 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH6P55285 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH6P55285 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CDH6P55285 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH6P55285 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.55■□□□□ 0.56
CDH6P55285 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CDH6P55285 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH6P55285 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH6P55285 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH6P55285 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH6P55285 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH6P55285 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.55■□□□□ 0.56
CDH6P55285 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH6P55285 AC112698.1-201ENST00000510299 916 ntBASIC18.55■□□□□ 0.56
CDH6P55285 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH6P55285 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDH6P55285 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH6P55285 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH6P55285 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH6P55285 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CDH6P55285 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH6P55285 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH6P55285 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH6P55285 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH6P55285 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH6P55285 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH6P55285 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH6P55285 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CDH6P55285 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CDH6P55285 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.54■□□□□ 0.56
CDH6P55285 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.54■□□□□ 0.56
CDH6P55285 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDH6P55285 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH6P55285 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDH6P55285 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH6P55285 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH6P55285 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH6P55285 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CDH6P55285 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH6P55285 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CDH6P55285 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH6P55285 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH6P55285 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH6P55285 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CDH6P55285 AL645929.1-201ENST00000420084 975 ntBASIC18.53■□□□□ 0.56
CDH6P55285 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH6P55285 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH6P55285 AL590326.2-201ENST00000625139 305 ntBASIC18.53■□□□□ 0.56
CDH6P55285 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.53■□□□□ 0.56
CDH6P55285 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
CDH6P55285 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CDH6P55285 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH6P55285 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms