Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NUBP1P53384 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 MIR943-201ENST00000401286 94 ntBASIC17.69■□□□□ 0.42
NUBP1P53384 NME2P1-201ENST00000426182 414 ntBASIC17.69■□□□□ 0.42
NUBP1P53384 KLF2P3-201ENST00000451977 1087 ntBASIC17.69■□□□□ 0.42
NUBP1P53384 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 AP005018.1-201ENST00000525475 301 ntBASIC17.69■□□□□ 0.42
NUBP1P53384 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC17.69■□□□□ 0.42
NUBP1P53384 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.69■□□□□ 0.42
NUBP1P53384 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NUBP1P53384 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.69■□□□□ 0.42
NUBP1P53384 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.69■□□□□ 0.42
NUBP1P53384 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.69■□□□□ 0.42
NUBP1P53384 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NUBP1P53384 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NUBP1P53384 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.69■□□□□ 0.42
NUBP1P53384 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC17.69■□□□□ 0.42
NUBP1P53384 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NUBP1P53384 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 TUBB3P1-201ENST00000405796 1332 ntBASIC17.69■□□□□ 0.42
NUBP1P53384 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUBP1P53384 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.68■□□□□ 0.42
NUBP1P53384 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUBP1P53384 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUBP1P53384 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.68■□□□□ 0.42
NUBP1P53384 MIR661-201ENST00000384842 89 ntBASIC17.68■□□□□ 0.42
NUBP1P53384 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC17.68■□□□□ 0.42
NUBP1P53384 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.68■□□□□ 0.42
NUBP1P53384 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NUBP1P53384 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.68■□□□□ 0.42
NUBP1P53384 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NUBP1P53384 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC17.68■□□□□ 0.42
NUBP1P53384 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUBP1P53384 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NUBP1P53384 OR7E47P-204ENST00000575924 449 ntBASIC17.68■□□□□ 0.42
NUBP1P53384 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.68■□□□□ 0.42
NUBP1P53384 AL450472.2-201ENST00000603663 1156 ntBASIC17.68■□□□□ 0.42
NUBP1P53384 BNIP3P35-201ENST00000604530 490 ntBASIC17.68■□□□□ 0.42
NUBP1P53384 AC026120.1-201ENST00000611536 926 ntBASIC17.68■□□□□ 0.42
NUBP1P53384 AP001059.3-201ENST00000619053 235 ntBASIC17.68■□□□□ 0.42
NUBP1P53384 AC109809.1-201ENST00000619665 545 ntBASIC17.68■□□□□ 0.42
NUBP1P53384 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUBP1P53384 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.68■□□□□ 0.42
NUBP1P53384 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUBP1P53384 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NUBP1P53384 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NUBP1P53384 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUBP1P53384 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUBP1P53384 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC17.67■□□□□ 0.42
NUBP1P53384 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUBP1P53384 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
NUBP1P53384 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NUBP1P53384 AL137060.1-201ENST00000618151 2648 ntBASIC17.67■□□□□ 0.42
NUBP1P53384 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUBP1P53384 AC002056.1-201ENST00000395613 760 ntBASIC17.67■□□□□ 0.42
NUBP1P53384 AC107890.1-201ENST00000422478 521 ntBASIC17.67■□□□□ 0.42
NUBP1P53384 ADH5P3-201ENST00000433842 1137 ntBASIC17.67■□□□□ 0.42
NUBP1P53384 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.67■□□□□ 0.42
NUBP1P53384 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUBP1P53384 ELL2P2-201ENST00000515135 694 ntBASIC17.67■□□□□ 0.42
NUBP1P53384 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC17.67■□□□□ 0.42
NUBP1P53384 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NUBP1P53384 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NUBP1P53384 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.67■□□□□ 0.42
NUBP1P53384 MKKS-203ENST00000609375 882 ntTSL 2 BASIC17.67■□□□□ 0.42
NUBP1P53384 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
NUBP1P53384 METTL15-211ENST00000634762 718 ntTSL 5 BASIC17.67■□□□□ 0.42
NUBP1P53384 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUBP1P53384 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUBP1P53384 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NUBP1P53384 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUBP1P53384 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUBP1P53384 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 TCF3P1-201ENST00000423021 1937 ntBASIC17.66■□□□□ 0.42
NUBP1P53384 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.66■□□□□ 0.42
NUBP1P53384 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NUBP1P53384 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.66■□□□□ 0.42
NUBP1P53384 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.66■□□□□ 0.42
NUBP1P53384 AL121949.1-201ENST00000402043 968 ntBASIC17.66■□□□□ 0.42
NUBP1P53384 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms