Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CLCN2P51788 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.3■□□□□ 0.36
CLCN2P51788 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN2P51788 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCN2P51788 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCN2P51788 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN2P51788 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN2P51788 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN2P51788 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN2P51788 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CLCN2P51788 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLCN2P51788 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN2P51788 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCN2P51788 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCN2P51788 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CLCN2P51788 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCN2P51788 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
CLCN2P51788 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCN2P51788 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN2P51788 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLCN2P51788 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLCN2P51788 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN2P51788 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
CLCN2P51788 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN2P51788 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN2P51788 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.28■□□□□ 0.36
CLCN2P51788 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.28■□□□□ 0.36
CLCN2P51788 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN2P51788 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.28■□□□□ 0.36
CLCN2P51788 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLCN2P51788 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLCN2P51788 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN2P51788 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN2P51788 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.27■□□□□ 0.36
CLCN2P51788 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.27■□□□□ 0.36
CLCN2P51788 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.27■□□□□ 0.36
CLCN2P51788 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.27■□□□□ 0.36
CLCN2P51788 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN2P51788 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN2P51788 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN2P51788 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN2P51788 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN2P51788 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
CLCN2P51788 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN2P51788 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.27■□□□□ 0.36
CLCN2P51788 PP12613-201ENST00000424958 2230 ntBASIC17.27■□□□□ 0.36
CLCN2P51788 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN2P51788 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN2P51788 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN2P51788 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN2P51788 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN2P51788 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN2P51788 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms