Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.69■□□□□ 0.1
CX3CR1P49238 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.69■□□□□ 0.1
CX3CR1P49238 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.69■□□□□ 0.1
CX3CR1P49238 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.69■□□□□ 0.1
CX3CR1P49238 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CX3CR1P49238 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.69■□□□□ 0.1
CX3CR1P49238 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CX3CR1P49238 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
CX3CR1P49238 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.68■□□□□ 0.1
CX3CR1P49238 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.68■□□□□ 0.1
CX3CR1P49238 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.68■□□□□ 0.1
CX3CR1P49238 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CX3CR1P49238 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.68■□□□□ 0.1
CX3CR1P49238 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CX3CR1P49238 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CX3CR1P49238 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.68■□□□□ 0.1
CX3CR1P49238 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.68■□□□□ 0.1
CX3CR1P49238 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CX3CR1P49238 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.68■□□□□ 0.1
CX3CR1P49238 AC113347.1-201ENST00000413321 391 ntBASIC15.68■□□□□ 0.1
CX3CR1P49238 AL137013.1-201ENST00000432946 1228 ntBASIC15.68■□□□□ 0.1
CX3CR1P49238 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.68■□□□□ 0.1
CX3CR1P49238 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CX3CR1P49238 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.68■□□□□ 0.1
CX3CR1P49238 AL136038.4-201ENST00000603606 1261 ntBASIC15.68■□□□□ 0.1
CX3CR1P49238 AC005363.2-201ENST00000618631 242 ntBASIC15.68■□□□□ 0.1
CX3CR1P49238 AC073912.3-201ENST00000624414 853 ntBASIC15.68■□□□□ 0.1
CX3CR1P49238 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.68■□□□□ 0.1
CX3CR1P49238 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CX3CR1P49238 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.68■□□□□ 0.1
CX3CR1P49238 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.68■□□□□ 0.1
CX3CR1P49238 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CX3CR1P49238 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.67■□□□□ 0.1
CX3CR1P49238 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.67■□□□□ 0.1
CX3CR1P49238 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CX3CR1P49238 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.67■□□□□ 0.1
CX3CR1P49238 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.67■□□□□ 0.1
CX3CR1P49238 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.67■□□□□ 0.1
CX3CR1P49238 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.67■□□□□ 0.1
CX3CR1P49238 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.67■□□□□ 0.1
CX3CR1P49238 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 AL391807.1-203ENST00000604392 2365 ntBASIC15.67■□□□□ 0.1
CX3CR1P49238 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CX3CR1P49238 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.67■□□□□ 0.1
CX3CR1P49238 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.67■□□□□ 0.1
CX3CR1P49238 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CX3CR1P49238 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CX3CR1P49238 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CX3CR1P49238 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CX3CR1P49238 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CX3CR1P49238 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CX3CR1P49238 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CX3CR1P49238 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CX3CR1P49238 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.67■□□□□ 0.1
CX3CR1P49238 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.67■□□□□ 0.1
CX3CR1P49238 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CX3CR1P49238 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CX3CR1P49238 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms