Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A1P43005 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC1A1P43005 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A1P43005 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A1P43005 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 CROCCP2-202ENST00000412962 2773 ntBASIC18.65■□□□□ 0.58
SLC1A1P43005 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 BX276092.7-203ENST00000637198 1536 ntBASIC18.65■□□□□ 0.58
SLC1A1P43005 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC1A1P43005 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC1A1P43005 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SLC1A1P43005 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC1A1P43005 TERF1P1-201ENST00000311003 1181 ntBASIC18.65■□□□□ 0.58
SLC1A1P43005 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 IGHGP-201ENST00000390555 1178 ntBASIC18.65■□□□□ 0.58
SLC1A1P43005 YBX1P2-201ENST00000489612 999 ntBASIC18.65■□□□□ 0.58
SLC1A1P43005 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC1A1P43005 AC139887.4-201ENST00000607877 719 ntBASIC18.65■□□□□ 0.58
SLC1A1P43005 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC1A1P43005 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC1A1P43005 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC1A1P43005 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC1A1P43005 AC073508.3-201ENST00000619697 1419 ntBASIC18.65■□□□□ 0.58
SLC1A1P43005 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
SLC1A1P43005 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC1A1P43005 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A1P43005 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC1A1P43005 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
SLC1A1P43005 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SLC1A1P43005 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC1A1P43005 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC1A1P43005 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC1A1P43005 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 MIR662-201ENST00000384847 95 ntBASIC18.64■□□□□ 0.57
SLC1A1P43005 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC1A1P43005 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC1A1P43005 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC1A1P43005 AP003733.1-201ENST00000491725 852 ntBASIC18.64■□□□□ 0.57
SLC1A1P43005 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC1A1P43005 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.64■□□□□ 0.57
SLC1A1P43005 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
SLC1A1P43005 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SLC1A1P43005 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC1A1P43005 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 AC073912.3-201ENST00000624414 853 ntBASIC18.64■□□□□ 0.57
SLC1A1P43005 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SLC1A1P43005 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SLC1A1P43005 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A1P43005 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC1A1P43005 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC1A1P43005 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SLC1A1P43005 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC1A1P43005 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC1A1P43005 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.63■□□□□ 0.57
SLC1A1P43005 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC1A1P43005 ZNF444P1-201ENST00000559497 298 ntBASIC18.63■□□□□ 0.57
SLC1A1P43005 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC1A1P43005 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.63■□□□□ 0.57
SLC1A1P43005 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A1P43005 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms