Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.81■□□□□ 0.6
RFC1P35251 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RFC1P35251 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RFC1P35251 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.81■□□□□ 0.6
RFC1P35251 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RFC1P35251 KRT8P47-201ENST00000604727 1398 ntBASIC18.81■□□□□ 0.6
RFC1P35251 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.8■□□□□ 0.6
RFC1P35251 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.8■□□□□ 0.6
RFC1P35251 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.8■□□□□ 0.6
RFC1P35251 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RFC1P35251 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.8■□□□□ 0.6
RFC1P35251 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.8■□□□□ 0.6
RFC1P35251 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.8■□□□□ 0.6
RFC1P35251 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.8■□□□□ 0.6
RFC1P35251 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.8■□□□□ 0.6
RFC1P35251 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.8■□□□□ 0.6
RFC1P35251 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.8■□□□□ 0.6
RFC1P35251 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RFC1P35251 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RFC1P35251 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.8■□□□□ 0.6
RFC1P35251 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFC1P35251 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RFC1P35251 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RFC1P35251 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RFC1P35251 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.8■□□□□ 0.6
RFC1P35251 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RFC1P35251 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RFC1P35251 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.79■□□□□ 0.6
RFC1P35251 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.79■□□□□ 0.6
RFC1P35251 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.79■□□□□ 0.6
RFC1P35251 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.79■□□□□ 0.6
RFC1P35251 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.79■□□□□ 0.6
RFC1P35251 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.79■□□□□ 0.6
RFC1P35251 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.79■□□□□ 0.6
RFC1P35251 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 AC068472.1-201ENST00000474589 881 ntBASIC18.79■□□□□ 0.6
RFC1P35251 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.79■□□□□ 0.6
RFC1P35251 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.79■□□□□ 0.6
RFC1P35251 AL136038.3-201ENST00000561909 1096 ntBASIC18.79■□□□□ 0.6
RFC1P35251 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.79■□□□□ 0.6
RFC1P35251 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.79■□□□□ 0.6
RFC1P35251 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.79■□□□□ 0.6
RFC1P35251 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
RFC1P35251 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFC1P35251 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RFC1P35251 AC009949.1-201ENST00000623048 1830 ntBASIC18.79■□□□□ 0.6
RFC1P35251 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.79■□□□□ 0.6
RFC1P35251 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RFC1P35251 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.78■□□□□ 0.6
RFC1P35251 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.78■□□□□ 0.6
RFC1P35251 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC1P35251 AC112698.1-201ENST00000510299 916 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms