Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP24386 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP24386 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP24386 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP24386 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHMP24386 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP24386 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CHMP24386 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHMP24386 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP24386 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.68■□□□□ 0.26
CHMP24386 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.68■□□□□ 0.26
CHMP24386 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.68■□□□□ 0.26
CHMP24386 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
CHMP24386 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP24386 AC083849.1-201ENST00000615227 514 ntBASIC16.68■□□□□ 0.26
CHMP24386 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP24386 AP000550.4-202ENST00000639755 178 ntBASIC16.68■□□□□ 0.26
CHMP24386 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP24386 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CHMP24386 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CHMP24386 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP24386 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP24386 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CHMP24386 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CHMP24386 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP24386 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP24386 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP24386 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CHMP24386 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CHMP24386 FAM86EP-206ENST00000510506 987 ntBASIC16.67■□□□□ 0.26
CHMP24386 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.67■□□□□ 0.26
CHMP24386 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP24386 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.67■□□□□ 0.26
CHMP24386 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.67■□□□□ 0.26
CHMP24386 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CHMP24386 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CHMP24386 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CHMP24386 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CHMP24386 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CHMP24386 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP24386 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHMP24386 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CHMP24386 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CHMP24386 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.66■□□□□ 0.26
CHMP24386 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.66■□□□□ 0.26
CHMP24386 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
CHMP24386 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 HLA-F-220ENST00000434407 884 ntBASIC16.66■□□□□ 0.26
CHMP24386 PVRIG2P-201ENST00000435460 978 ntBASIC16.66■□□□□ 0.26
CHMP24386 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.66■□□□□ 0.26
CHMP24386 AC092597.1-201ENST00000487352 616 ntBASIC16.66■□□□□ 0.26
CHMP24386 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP24386 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP24386 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms