Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.97■□□□□ 0.47
CCND1P24385 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.97■□□□□ 0.47
CCND1P24385 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCND1P24385 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.97■□□□□ 0.47
CCND1P24385 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.97■□□□□ 0.47
CCND1P24385 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.97■□□□□ 0.47
CCND1P24385 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCND1P24385 AC009065.1-201ENST00000564055 1225 ntBASIC17.97■□□□□ 0.47
CCND1P24385 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CCND1P24385 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.97■□□□□ 0.47
CCND1P24385 AC133561.5-201ENST00000635547 218 ntBASIC17.97■□□□□ 0.47
CCND1P24385 AC097493.4-201ENST00000641197 219 ntBASIC17.97■□□□□ 0.47
CCND1P24385 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.97■□□□□ 0.47
CCND1P24385 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CCND1P24385 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.97■□□□□ 0.47
CCND1P24385 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CCND1P24385 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CCND1P24385 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCND1P24385 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCND1P24385 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCND1P24385 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCND1P24385 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCND1P24385 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCND1P24385 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCND1P24385 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.96■□□□□ 0.47
CCND1P24385 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCND1P24385 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.96■□□□□ 0.47
CCND1P24385 KRT18P23-201ENST00000435622 1283 ntBASIC17.96■□□□□ 0.47
CCND1P24385 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCND1P24385 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.96■□□□□ 0.47
CCND1P24385 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCND1P24385 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.96■□□□□ 0.47
CCND1P24385 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.96■□□□□ 0.47
CCND1P24385 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.96■□□□□ 0.47
CCND1P24385 AC012306.2-201ENST00000609350 630 ntBASIC17.96■□□□□ 0.47
CCND1P24385 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.96■□□□□ 0.47
CCND1P24385 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
CCND1P24385 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCND1P24385 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCND1P24385 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.96■□□□□ 0.47
CCND1P24385 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.96■□□□□ 0.47
CCND1P24385 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCND1P24385 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCND1P24385 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.96■□□□□ 0.47
CCND1P24385 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCND1P24385 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCND1P24385 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCND1P24385 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCND1P24385 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCND1P24385 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.46
CCND1P24385 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CCND1P24385 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCND1P24385 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.95■□□□□ 0.46
CCND1P24385 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CCND1P24385 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCND1P24385 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCND1P24385 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 FLJ13224-201ENST00000313737 1514 ntBASIC17.95■□□□□ 0.46
CCND1P24385 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.95■□□□□ 0.46
CCND1P24385 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.95■□□□□ 0.46
CCND1P24385 SLC25A3P1-201ENST00000443844 931 ntBASIC17.95■□□□□ 0.46
CCND1P24385 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.95■□□□□ 0.46
CCND1P24385 AC112497.1-201ENST00000624824 639 ntBASIC17.95■□□□□ 0.46
CCND1P24385 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CCND1P24385 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCND1P24385 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCND1P24385 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CCND1P24385 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCND1P24385 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCND1P24385 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms