Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.24■□□□□ 0.99
NCLP19338 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NCLP19338 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCLP19338 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
NCLP19338 GPAT2P1-201ENST00000444924 1672 ntBASIC21.24■□□□□ 0.99
NCLP19338 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCLP19338 AC008894.3-201ENST00000624324 3103 ntBASIC21.24■□□□□ 0.99
NCLP19338 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCLP19338 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NCLP19338 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
NCLP19338 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
NCLP19338 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 MIR564-202ENST00000385049 94 ntBASIC21.23■□□□□ 0.99
NCLP19338 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
NCLP19338 AL023284.2-201ENST00000405850 579 ntBASIC21.23■□□□□ 0.99
NCLP19338 KRT18P21-201ENST00000515767 1272 ntBASIC21.23■□□□□ 0.99
NCLP19338 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.23■□□□□ 0.99
NCLP19338 AC145285.6-201ENST00000604632 637 ntBASIC21.23■□□□□ 0.99
NCLP19338 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 AC022211.2-201ENST00000585075 2527 ntBASIC21.23■□□□□ 0.99
NCLP19338 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.23■□□□□ 0.99
NCLP19338 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
NCLP19338 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NCLP19338 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
NCLP19338 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.22■□□□□ 0.99
NCLP19338 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NCLP19338 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
NCLP19338 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.22■□□□□ 0.99
NCLP19338 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 AL390955.1-201ENST00000428694 934 ntBASIC21.22■□□□□ 0.99
NCLP19338 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.22■□□□□ 0.99
NCLP19338 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.22■□□□□ 0.99
NCLP19338 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.22■□□□□ 0.99
NCLP19338 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.22■□□□□ 0.99
NCLP19338 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 PHGDH-209ENST00000641074 1780 ntBASIC21.22■□□□□ 0.99
NCLP19338 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.22■□□□□ 0.99
NCLP19338 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NCLP19338 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NCLP19338 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
NCLP19338 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NCLP19338 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLP19338 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.21■□□□□ 0.99
NCLP19338 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLP19338 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.21■□□□□ 0.99
NCLP19338 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLP19338 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NCLP19338 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.21■□□□□ 0.99
NCLP19338 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLP19338 AP000593.1-201ENST00000393668 712 ntBASIC21.21■□□□□ 0.99
NCLP19338 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.21■□□□□ 0.99
NCLP19338 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.21■□□□□ 0.99
NCLP19338 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.21■□□□□ 0.99
NCLP19338 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLP19338 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
NCLP19338 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.21■□□□□ 0.99
NCLP19338 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NCLP19338 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLP19338 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.21■□□□□ 0.99
NCLP19338 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NCLP19338 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.21■□□□□ 0.99
NCLP19338 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCLP19338 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
NCLP19338 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCLP19338 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.2■□□□□ 0.98
NCLP19338 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCLP19338 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCLP19338 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NCLP19338 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NCLP19338 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCLP19338 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
NCLP19338 RCN1P1-201ENST00000400413 996 ntBASIC21.2■□□□□ 0.98
NCLP19338 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.2■□□□□ 0.98
NCLP19338 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
NCLP19338 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
NCLP19338 DGCR10-201ENST00000609839 495 ntBASIC21.2■□□□□ 0.98
NCLP19338 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NCLP19338 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.2■□□□□ 0.98
NCLP19338 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NCLP19338 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms