Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.92■□□□□ 0.46
SRFP11831 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.92■□□□□ 0.46
SRFP11831 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SRFP11831 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.92■□□□□ 0.46
SRFP11831 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRFP11831 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRFP11831 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SRFP11831 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.92■□□□□ 0.46
SRFP11831 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SRFP11831 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.91■□□□□ 0.46
SRFP11831 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SRFP11831 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.91■□□□□ 0.46
SRFP11831 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SRFP11831 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SRFP11831 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.91■□□□□ 0.46
SRFP11831 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.91■□□□□ 0.46
SRFP11831 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.91■□□□□ 0.46
SRFP11831 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.91■□□□□ 0.46
SRFP11831 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.91■□□□□ 0.46
SRFP11831 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.91■□□□□ 0.46
SRFP11831 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.91■□□□□ 0.46
SRFP11831 AC138761.1-201ENST00000584393 385 ntBASIC17.91■□□□□ 0.46
SRFP11831 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.91■□□□□ 0.46
SRFP11831 AC005498.2-205ENST00000593218 784 ntBASIC17.91■□□□□ 0.46
SRFP11831 AC022145.2-201ENST00000598203 171 ntBASIC17.91■□□□□ 0.46
SRFP11831 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.91■□□□□ 0.46
SRFP11831 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SRFP11831 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SRFP11831 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SRFP11831 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.9■□□□□ 0.46
SRFP11831 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.9■□□□□ 0.46
SRFP11831 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.9■□□□□ 0.46
SRFP11831 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.9■□□□□ 0.46
SRFP11831 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.9■□□□□ 0.46
SRFP11831 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.9■□□□□ 0.46
SRFP11831 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 FAM86GP-201ENST00000448322 971 ntBASIC17.9■□□□□ 0.46
SRFP11831 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.9■□□□□ 0.46
SRFP11831 CXCL1P1-201ENST00000502804 216 ntBASIC17.9■□□□□ 0.46
SRFP11831 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.9■□□□□ 0.46
SRFP11831 AC109322.1-201ENST00000524499 1264 ntBASIC17.9■□□□□ 0.46
SRFP11831 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SRFP11831 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
SRFP11831 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.9■□□□□ 0.46
SRFP11831 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.9■□□□□ 0.46
SRFP11831 MIR4745-201ENST00000577608 62 ntBASIC17.9■□□□□ 0.46
SRFP11831 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.9■□□□□ 0.46
SRFP11831 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.9■□□□□ 0.46
SRFP11831 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.9■□□□□ 0.46
SRFP11831 LINC00628-201ENST00000628516 1289 ntBASIC17.9■□□□□ 0.46
SRFP11831 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SRFP11831 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.9■□□□□ 0.46
SRFP11831 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SRFP11831 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SRFP11831 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.9■□□□□ 0.46
SRFP11831 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SRFP11831 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRFP11831 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SRFP11831 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.89■□□□□ 0.45
SRFP11831 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.89■□□□□ 0.45
SRFP11831 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.89■□□□□ 0.45
SRFP11831 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SRFP11831 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.89■□□□□ 0.45
SRFP11831 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRFP11831 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SRFP11831 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRFP11831 LINC00982-205ENST00000420957 435 ntBASIC17.89■□□□□ 0.45
SRFP11831 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRFP11831 IGHV3-52-201ENST00000519770 353 ntBASIC17.89■□□□□ 0.45
SRFP11831 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms