Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
PF4V1P10720 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.14□□□□□ -0.15
PF4V1P10720 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.14□□□□□ -0.15
PF4V1P10720 AC011840.4-201ENST00000578471 627 ntBASIC14.14□□□□□ -0.15
PF4V1P10720 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.14□□□□□ -0.15
PF4V1P10720 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.14□□□□□ -0.15
PF4V1P10720 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PF4V1P10720 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
PF4V1P10720 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.14□□□□□ -0.15
PF4V1P10720 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PF4V1P10720 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.14□□□□□ -0.15
PF4V1P10720 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.14□□□□□ -0.15
PF4V1P10720 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PF4V1P10720 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.14□□□□□ -0.15
PF4V1P10720 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.14□□□□□ -0.15
PF4V1P10720 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.14□□□□□ -0.15
PF4V1P10720 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PF4V1P10720 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 AC233702.3-201ENST00000578656 1387 ntBASIC14.13□□□□□ -0.15
PF4V1P10720 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PF4V1P10720 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 KRT17P6-201ENST00000453795 1220 ntBASIC14.13□□□□□ -0.15
PF4V1P10720 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.13□□□□□ -0.15
PF4V1P10720 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.13□□□□□ -0.15
PF4V1P10720 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 UNC93B7-201ENST00000509439 705 ntBASIC14.13□□□□□ -0.15
PF4V1P10720 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.13□□□□□ -0.15
PF4V1P10720 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
PF4V1P10720 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
PF4V1P10720 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.13□□□□□ -0.15
PF4V1P10720 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.13□□□□□ -0.15
PF4V1P10720 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PF4V1P10720 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PF4V1P10720 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.13□□□□□ -0.15
PF4V1P10720 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PF4V1P10720 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PF4V1P10720 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PF4V1P10720 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.12□□□□□ -0.15
PF4V1P10720 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PF4V1P10720 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.12□□□□□ -0.15
PF4V1P10720 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.12□□□□□ -0.15
PF4V1P10720 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.12□□□□□ -0.15
PF4V1P10720 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
PF4V1P10720 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PF4V1P10720 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.12□□□□□ -0.15
PF4V1P10720 EMBP1-201ENST00000458200 901 ntBASIC14.12□□□□□ -0.15
PF4V1P10720 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.12□□□□□ -0.15
PF4V1P10720 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.12□□□□□ -0.15
PF4V1P10720 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PF4V1P10720 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.12□□□□□ -0.15
PF4V1P10720 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.12□□□□□ -0.15
PF4V1P10720 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.12□□□□□ -0.15
PF4V1P10720 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.12□□□□□ -0.15
PF4V1P10720 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.12□□□□□ -0.15
PF4V1P10720 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.12□□□□□ -0.15
PF4V1P10720 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
PF4V1P10720 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PF4V1P10720 AC093677.2-201ENST00000600169 1863 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms