Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 PMS2P1-201ENST00000431037 1228 ntBASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 AC005332.8-201ENST00000622750 2735 ntBASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40ALP0C0E4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 AC139887.3-201ENST00000568585 713 ntBASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 AC023511.2-201ENST00000618803 211 ntBASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 AC117500.6-201ENST00000624871 588 ntBASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 FAM215A-202ENST00000632077 792 ntBASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 AF228730.7-201ENST00000641842 219 ntBASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 AC132938.6-201ENST00000623828 1655 ntBASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40ALP0C0E4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 ESPNP-201ENST00000270691 2015 ntBASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 BICD1-207ENST00000551848 1962 ntBASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 AL356309.3-201ENST00000624132 1934 ntBASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 AL139288.1-201ENST00000623748 933 ntBASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40ALP0C0E4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RAB40ALP0C0E4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.77■□□□□ 0.27
RAB40ALP0C0E4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40ALP0C0E4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms