Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL1A2P08123 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL1A2P08123 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.46■□□□□ 0.71
COL1A2P08123 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.46■□□□□ 0.71
COL1A2P08123 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.46■□□□□ 0.71
COL1A2P08123 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.46■□□□□ 0.71
COL1A2P08123 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
COL1A2P08123 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL1A2P08123 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.46■□□□□ 0.71
COL1A2P08123 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.46■□□□□ 0.71
COL1A2P08123 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.46■□□□□ 0.71
COL1A2P08123 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
COL1A2P08123 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.46■□□□□ 0.71
COL1A2P08123 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.46■□□□□ 0.71
COL1A2P08123 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.46■□□□□ 0.71
COL1A2P08123 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.7
COL1A2P08123 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.45■□□□□ 0.7
COL1A2P08123 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.45■□□□□ 0.7
COL1A2P08123 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.45■□□□□ 0.7
COL1A2P08123 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.45■□□□□ 0.7
COL1A2P08123 STK19B-204ENST00000512515 211 ntBASIC19.45■□□□□ 0.7
COL1A2P08123 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.45■□□□□ 0.7
COL1A2P08123 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
COL1A2P08123 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
COL1A2P08123 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COL1A2P08123 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL1A2P08123 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.45■□□□□ 0.7
COL1A2P08123 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.45■□□□□ 0.7
COL1A2P08123 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
COL1A2P08123 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
COL1A2P08123 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 AC138028.4-201ENST00000564984 1845 ntBASIC19.45■□□□□ 0.7
COL1A2P08123 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL1A2P08123 AL591424.1-201ENST00000442569 1213 ntBASIC19.44■□□□□ 0.7
COL1A2P08123 AC136632.2-201ENST00000512891 861 ntBASIC19.44■□□□□ 0.7
COL1A2P08123 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.44■□□□□ 0.7
COL1A2P08123 UNC93B6-202ENST00000528242 690 ntBASIC19.44■□□□□ 0.7
COL1A2P08123 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.44■□□□□ 0.7
COL1A2P08123 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
COL1A2P08123 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.44■□□□□ 0.7
COL1A2P08123 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.44■□□□□ 0.7
COL1A2P08123 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 AC004706.3-202ENST00000621574 984 ntBASIC19.44■□□□□ 0.7
COL1A2P08123 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.44■□□□□ 0.7
COL1A2P08123 AC009113.1-201ENST00000570267 2443 ntBASIC19.44■□□□□ 0.7
COL1A2P08123 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 AC009336.1-201ENST00000608941 1553 ntBASIC19.44■□□□□ 0.7
COL1A2P08123 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.44■□□□□ 0.7
COL1A2P08123 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.44■□□□□ 0.7
COL1A2P08123 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL1A2P08123 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.44■□□□□ 0.7
COL1A2P08123 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COL1A2P08123 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
COL1A2P08123 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.44■□□□□ 0.7
COL1A2P08123 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COL1A2P08123 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL1A2P08123 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.44■□□□□ 0.7
COL1A2P08123 POLD2P1-201ENST00000511220 997 ntBASIC19.44■□□□□ 0.7
COL1A2P08123 TERC-201ENST00000602385 541 ntBASIC19.44■□□□□ 0.7
COL1A2P08123 AC027601.4-201ENST00000611259 610 ntBASIC19.44■□□□□ 0.7
COL1A2P08123 FAM197Y3-203ENST00000618346 717 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms