Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 AD000864.1-201ENST00000624076 2295 ntBASIC18.19■□□□□ 0.5
MT-ND3P03897 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
MT-ND3P03897 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.19■□□□□ 0.5
MT-ND3P03897 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND3P03897 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND3P03897 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND3P03897 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND3P03897 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND3P03897 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND3P03897 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
MT-ND3P03897 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND3P03897 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.18■□□□□ 0.5
MT-ND3P03897 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.18■□□□□ 0.5
MT-ND3P03897 LINC01126-201ENST00000623515 1646 ntBASIC18.18■□□□□ 0.5
MT-ND3P03897 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND3P03897 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND3P03897 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
MT-ND3P03897 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MT-ND3P03897 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND3P03897 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
MT-ND3P03897 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.18■□□□□ 0.5
MT-ND3P03897 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.18■□□□□ 0.5
MT-ND3P03897 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND3P03897 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND3P03897 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
MT-ND3P03897 CROCCP1-201ENST00000426910 5675 ntBASIC18.17■□□□□ 0.5
MT-ND3P03897 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-ND3P03897 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-ND3P03897 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 AC117947.1-201ENST00000427448 529 ntBASIC18.17■□□□□ 0.5
MT-ND3P03897 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
MT-ND3P03897 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.17■□□□□ 0.5
MT-ND3P03897 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-ND3P03897 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-ND3P03897 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-ND3P03897 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-ND3P03897 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
MT-ND3P03897 AC141257.4-201ENST00000634557 245 ntBASIC18.17■□□□□ 0.5
MT-ND3P03897 AC136944.6-201ENST00000634818 245 ntBASIC18.17■□□□□ 0.5
MT-ND3P03897 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-ND3P03897 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
MT-ND3P03897 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-ND3P03897 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND3P03897 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-ND3P03897 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-ND3P03897 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
MT-ND3P03897 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.16■□□□□ 0.5
MT-ND3P03897 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.16■□□□□ 0.5
MT-ND3P03897 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
MT-ND3P03897 FAM8A6P-201ENST00000407496 1135 ntBASIC18.16■□□□□ 0.5
MT-ND3P03897 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.16■□□□□ 0.5
MT-ND3P03897 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.16■□□□□ 0.5
MT-ND3P03897 AC092647.4-201ENST00000457211 535 ntBASIC18.16■□□□□ 0.5
MT-ND3P03897 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
MT-ND3P03897 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.16■□□□□ 0.5
MT-ND3P03897 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.16■□□□□ 0.5
MT-ND3P03897 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-ND3P03897 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.16■□□□□ 0.5
MT-ND3P03897 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-ND3P03897 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
MT-ND3P03897 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-ND3P03897 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND3P03897 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
MT-ND3P03897 AL355312.1-201ENST00000407115 2176 ntBASIC18.15■□□□□ 0.5
MT-ND3P03897 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND3P03897 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MT-ND3P03897 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms