Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOEP02649 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOEP02649 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
APOEP02649 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOEP02649 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOEP02649 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.68■□□□□ 0.58
APOEP02649 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
APOEP02649 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.68■□□□□ 0.58
APOEP02649 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.68■□□□□ 0.58
APOEP02649 AC022898.2-201ENST00000616822 1312 ntBASIC18.68■□□□□ 0.58
APOEP02649 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOEP02649 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOEP02649 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.68■□□□□ 0.58
APOEP02649 AP000997.3-201ENST00000623333 2250 ntBASIC18.67■□□□□ 0.58
APOEP02649 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOEP02649 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOEP02649 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOEP02649 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.67■□□□□ 0.58
APOEP02649 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOEP02649 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
APOEP02649 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOEP02649 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
APOEP02649 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.67■□□□□ 0.58
APOEP02649 AC246785.2-201ENST00000432512 513 ntBASIC18.67■□□□□ 0.58
APOEP02649 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
APOEP02649 MTCL1P1-201ENST00000446207 792 ntBASIC18.67■□□□□ 0.58
APOEP02649 AC068472.1-201ENST00000474589 881 ntBASIC18.67■□□□□ 0.58
APOEP02649 AP000867.3-201ENST00000524675 377 ntBASIC18.67■□□□□ 0.58
APOEP02649 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.67■□□□□ 0.58
APOEP02649 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.67■□□□□ 0.58
APOEP02649 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOEP02649 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOEP02649 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.67■□□□□ 0.58
APOEP02649 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.67■□□□□ 0.58
APOEP02649 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOEP02649 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOEP02649 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOEP02649 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
APOEP02649 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOEP02649 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.67■□□□□ 0.58
APOEP02649 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOEP02649 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
APOEP02649 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.66■□□□□ 0.58
APOEP02649 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.66■□□□□ 0.58
APOEP02649 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.66■□□□□ 0.58
APOEP02649 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.66■□□□□ 0.58
APOEP02649 KRT18P56-201ENST00000507275 550 ntBASIC18.66■□□□□ 0.58
APOEP02649 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.66■□□□□ 0.58
APOEP02649 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.66■□□□□ 0.58
APOEP02649 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.66■□□□□ 0.58
APOEP02649 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.66■□□□□ 0.58
APOEP02649 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.66■□□□□ 0.58
APOEP02649 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.66■□□□□ 0.58
APOEP02649 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
APOEP02649 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 REXO1L9P-201ENST00000604264 2108 ntBASIC18.66■□□□□ 0.58
APOEP02649 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
APOEP02649 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.66■□□□□ 0.58
APOEP02649 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.66■□□□□ 0.58
APOEP02649 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.66■□□□□ 0.58
APOEP02649 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
APOEP02649 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
APOEP02649 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.66■□□□□ 0.58
APOEP02649 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 AC233702.3-201ENST00000578656 1387 ntBASIC18.66■□□□□ 0.58
APOEP02649 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOEP02649 OR6D1P-202ENST00000641007 5290 ntBASIC18.65■□□□□ 0.58
APOEP02649 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
APOEP02649 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.65■□□□□ 0.58
APOEP02649 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOEP02649 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOEP02649 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOEP02649 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOEP02649 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOEP02649 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.65■□□□□ 0.58
APOEP02649 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
APOEP02649 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOEP02649 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOEP02649 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOEP02649 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOEP02649 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOEP02649 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOEP02649 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
APOEP02649 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APOEP02649 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
APOEP02649 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.65■□□□□ 0.58
APOEP02649 AC104819.1-201ENST00000504587 486 ntBASIC18.65■□□□□ 0.58
APOEP02649 DUTP2-201ENST00000519164 463 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms