Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DRAP01903 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRAP01903 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRAP01903 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRAP01903 AC010460.3-201ENST00000511359 1579 ntBASIC19.16■□□□□ 0.66
HLA-DRAP01903 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRAP01903 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRAP01903 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRAP01903 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 AC092329.2-201ENST00000598402 547 ntBASIC19.16■□□□□ 0.66
HLA-DRAP01903 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRAP01903 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRAP01903 AC097374.2-201ENST00000618617 1306 ntBASIC19.16■□□□□ 0.66
HLA-DRAP01903 HTR7P1-202ENST00000624664 4411 ntBASIC19.16■□□□□ 0.66
HLA-DRAP01903 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRAP01903 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRAP01903 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DRAP01903 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HLA-DRAP01903 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRAP01903 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRAP01903 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRAP01903 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRAP01903 AC005332.8-201ENST00000622750 2735 ntBASIC19.15■□□□□ 0.66
HLA-DRAP01903 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRAP01903 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRAP01903 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRAP01903 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRAP01903 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 AP000867.3-201ENST00000524675 377 ntBASIC19.15■□□□□ 0.66
HLA-DRAP01903 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRAP01903 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 Z69720.1-201ENST00000601483 472 ntBASIC19.15■□□□□ 0.66
HLA-DRAP01903 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRAP01903 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRAP01903 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DRAP01903 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.15■□□□□ 0.66
HLA-DRAP01903 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.14■□□□□ 0.66
HLA-DRAP01903 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DRAP01903 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DRAP01903 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DRAP01903 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DRAP01903 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRAP01903 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRAP01903 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.14■□□□□ 0.65
HLA-DRAP01903 KRT17P6-201ENST00000453795 1220 ntBASIC19.14■□□□□ 0.65
HLA-DRAP01903 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.14■□□□□ 0.65
HLA-DRAP01903 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRAP01903 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DRAP01903 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.14■□□□□ 0.65
HLA-DRAP01903 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DRAP01903 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRAP01903 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DRAP01903 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRAP01903 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRAP01903 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRAP01903 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRAP01903 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DRAP01903 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRAP01903 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DRAP01903 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRAP01903 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DRAP01903 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DRAP01903 REXO1L11P-201ENST00000620964 1927 ntBASIC19.13■□□□□ 0.65
HLA-DRAP01903 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.13■□□□□ 0.65
HLA-DRAP01903 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HLA-DRAP01903 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DRAP01903 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DRAP01903 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DRAP01903 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
HLA-DRAP01903 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DRAP01903 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DRAP01903 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DRAP01903 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms