Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TIMP1P01033 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TIMP1P01033 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TIMP1P01033 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.14■□□□□ 0.65
TIMP1P01033 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.14■□□□□ 0.65
TIMP1P01033 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.14■□□□□ 0.65
TIMP1P01033 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.14■□□□□ 0.65
TIMP1P01033 AC093520.2-201ENST00000561830 333 ntBASIC19.14■□□□□ 0.65
TIMP1P01033 AC015911.4-201ENST00000588022 1070 ntBASIC19.14■□□□□ 0.65
TIMP1P01033 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.14■□□□□ 0.65
TIMP1P01033 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.14■□□□□ 0.65
TIMP1P01033 Z92544.3-201ENST00000624747 417 ntBASIC19.14■□□□□ 0.65
TIMP1P01033 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.14■□□□□ 0.65
TIMP1P01033 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMP1P01033 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMP1P01033 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TIMP1P01033 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMP1P01033 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMP1P01033 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIMP1P01033 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMP1P01033 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIMP1P01033 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMP1P01033 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMP1P01033 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIMP1P01033 LINC00982-205ENST00000420957 435 ntBASIC19.13■□□□□ 0.65
TIMP1P01033 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIMP1P01033 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMP1P01033 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.13■□□□□ 0.65
TIMP1P01033 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.13■□□□□ 0.65
TIMP1P01033 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMP1P01033 AL390955.2-201ENST00000603032 514 ntBASIC19.13■□□□□ 0.65
TIMP1P01033 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIMP1P01033 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.13■□□□□ 0.65
TIMP1P01033 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TIMP1P01033 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TIMP1P01033 AF228730.6-201ENST00000641497 218 ntBASIC19.13■□□□□ 0.65
TIMP1P01033 AC084121.3-201ENST00000641716 218 ntBASIC19.13■□□□□ 0.65
TIMP1P01033 AC105233.6-201ENST00000642093 218 ntBASIC19.13■□□□□ 0.65
TIMP1P01033 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIMP1P01033 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.13■□□□□ 0.65
TIMP1P01033 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TIMP1P01033 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIMP1P01033 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.13■□□□□ 0.65
TIMP1P01033 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TIMP1P01033 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIMP1P01033 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMP1P01033 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TIMP1P01033 PHGDH-209ENST00000641074 1780 ntBASIC19.12■□□□□ 0.65
TIMP1P01033 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.12■□□□□ 0.65
TIMP1P01033 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.12■□□□□ 0.65
TIMP1P01033 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.12■□□□□ 0.65
TIMP1P01033 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.12■□□□□ 0.65
TIMP1P01033 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.12■□□□□ 0.65
TIMP1P01033 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 AC005332.7-201ENST00000614046 2005 ntBASIC19.12■□□□□ 0.65
TIMP1P01033 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TIMP1P01033 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMP1P01033 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMP1P01033 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMP1P01033 PI4KAP1-204ENST00000612579 1703 ntBASIC19.11■□□□□ 0.65
TIMP1P01033 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMP1P01033 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.11■□□□□ 0.65
TIMP1P01033 AFG3L1P-217ENST00000557444 2447 ntBASIC19.11■□□□□ 0.65
TIMP1P01033 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.11■□□□□ 0.65
TIMP1P01033 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMP1P01033 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TIMP1P01033 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.11■□□□□ 0.65
TIMP1P01033 AC067863.1-201ENST00000494933 530 ntBASIC19.11■□□□□ 0.65
TIMP1P01033 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.11■□□□□ 0.65
TIMP1P01033 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.11■□□□□ 0.65
TIMP1P01033 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMP1P01033 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.11■□□□□ 0.65
TIMP1P01033 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.11■□□□□ 0.65
TIMP1P01033 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TIMP1P01033 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMP1P01033 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TIMP1P01033 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMP1P01033 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.11■□□□□ 0.65
TIMP1P01033 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMP1P01033 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.11■□□□□ 0.65
TIMP1P01033 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TIMP1P01033 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TIMP1P01033 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMP1P01033 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
TIMP1P01033 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms