Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.31■□□□□ 0.52
TTC4O95801 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TTC4O95801 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 SNORA78-201ENST00000459373 127 ntBASIC18.31■□□□□ 0.52
TTC4O95801 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.31■□□□□ 0.52
TTC4O95801 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.31■□□□□ 0.52
TTC4O95801 AL355075.4-201ENST00000554988 638 ntBASIC18.31■□□□□ 0.52
TTC4O95801 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.31■□□□□ 0.52
TTC4O95801 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TTC4O95801 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.31■□□□□ 0.52
TTC4O95801 AC008687.5-201ENST00000593746 558 ntBASIC18.31■□□□□ 0.52
TTC4O95801 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.31■□□□□ 0.52
TTC4O95801 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.31■□□□□ 0.52
TTC4O95801 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.31■□□□□ 0.52
TTC4O95801 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TTC4O95801 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.31■□□□□ 0.52
TTC4O95801 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TTC4O95801 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC4O95801 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC4O95801 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TTC4O95801 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.3■□□□□ 0.52
TTC4O95801 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
TTC4O95801 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.3■□□□□ 0.52
TTC4O95801 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TTC4O95801 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TTC4O95801 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC4O95801 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC4O95801 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.3■□□□□ 0.52
TTC4O95801 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TTC4O95801 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TTC4O95801 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TTC4O95801 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC4O95801 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC4O95801 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TTC4O95801 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TTC4O95801 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.3■□□□□ 0.52
TTC4O95801 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC4O95801 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC4O95801 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC4O95801 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TTC4O95801 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
TTC4O95801 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TTC4O95801 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC4O95801 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TTC4O95801 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
TTC4O95801 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC4O95801 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC4O95801 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
TTC4O95801 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC4O95801 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC4O95801 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TTC4O95801 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC4O95801 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC4O95801 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.28■□□□□ 0.52
TTC4O95801 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC4O95801 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms