Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP1O94782 AL355312.1-201ENST00000407115 2176 ntBASIC18.07■□□□□ 0.48
USP1O94782 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP1O94782 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
USP1O94782 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.06■□□□□ 0.48
USP1O94782 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
USP1O94782 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
USP1O94782 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.06■□□□□ 0.48
USP1O94782 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.06■□□□□ 0.48
USP1O94782 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.06■□□□□ 0.48
USP1O94782 RASA4DP-201ENST00000460726 1199 ntBASIC18.06■□□□□ 0.48
USP1O94782 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.06■□□□□ 0.48
USP1O94782 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
USP1O94782 AC010203.1-204ENST00000548782 407 ntBASIC18.06■□□□□ 0.48
USP1O94782 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.06■□□□□ 0.48
USP1O94782 AC010331.1-201ENST00000611423 582 ntBASIC18.06■□□□□ 0.48
USP1O94782 AL023973.1-201ENST00000624619 620 ntBASIC18.06■□□□□ 0.48
USP1O94782 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
USP1O94782 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
USP1O94782 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.06■□□□□ 0.48
USP1O94782 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP1O94782 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.06■□□□□ 0.48
USP1O94782 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.06■□□□□ 0.48
USP1O94782 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
USP1O94782 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.05■□□□□ 0.48
USP1O94782 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
USP1O94782 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
USP1O94782 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
USP1O94782 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.05■□□□□ 0.48
USP1O94782 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 AL031432.5-201ENST00000641059 760 ntBASIC18.05■□□□□ 0.48
USP1O94782 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.05■□□□□ 0.48
USP1O94782 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
USP1O94782 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
USP1O94782 AL645608.8-201ENST00000606034 2086 ntBASIC18.05■□□□□ 0.48
USP1O94782 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP1O94782 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
USP1O94782 PKD1P1-201ENST00000458669 6805 ntBASIC18.04■□□□□ 0.48
USP1O94782 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.04■□□□□ 0.48
USP1O94782 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.04■□□□□ 0.48
USP1O94782 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.04■□□□□ 0.48
USP1O94782 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.04■□□□□ 0.48
USP1O94782 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.04■□□□□ 0.48
USP1O94782 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
USP1O94782 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP1O94782 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.04■□□□□ 0.48
USP1O94782 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP1O94782 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP1O94782 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.04■□□□□ 0.48
USP1O94782 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.04■□□□□ 0.48
USP1O94782 AC133963.1-201ENST00000504166 1679 ntBASIC18.04■□□□□ 0.48
USP1O94782 TMPOP1-202ENST00000424642 1267 ntBASIC18.04■□□□□ 0.48
USP1O94782 KRT18P65-201ENST00000439811 1286 ntBASIC18.04■□□□□ 0.48
USP1O94782 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.04■□□□□ 0.48
USP1O94782 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.04■□□□□ 0.48
USP1O94782 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.04■□□□□ 0.48
USP1O94782 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.04■□□□□ 0.48
USP1O94782 AC140113.3-201ENST00000605663 199 ntBASIC18.04■□□□□ 0.48
USP1O94782 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.04■□□□□ 0.48
USP1O94782 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP1O94782 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP1O94782 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP1O94782 PP12613-201ENST00000424958 2230 ntBASIC18.04■□□□□ 0.48
USP1O94782 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP1O94782 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
USP1O94782 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.04■□□□□ 0.48
USP1O94782 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.04■□□□□ 0.48
USP1O94782 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
USP1O94782 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP1O94782 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
USP1O94782 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
USP1O94782 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP1O94782 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP1O94782 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms