Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT3O75175 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CNOT3O75175 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CNOT3O75175 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CNOT3O75175 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.31■□□□□ 0.36
CNOT3O75175 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.31■□□□□ 0.36
CNOT3O75175 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CNOT3O75175 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
CNOT3O75175 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.31■□□□□ 0.36
CNOT3O75175 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CNOT3O75175 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT3O75175 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT3O75175 AC084018.2-201ENST00000613093 2607 ntBASIC17.31■□□□□ 0.36
CNOT3O75175 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.31■□□□□ 0.36
CNOT3O75175 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 CHCHD2P8-201ENST00000429873 447 ntBASIC17.31■□□□□ 0.36
CNOT3O75175 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT3O75175 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.31■□□□□ 0.36
CNOT3O75175 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.31■□□□□ 0.36
CNOT3O75175 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.31■□□□□ 0.36
CNOT3O75175 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 AL390719.2-201ENST00000606993 987 ntBASIC17.31■□□□□ 0.36
CNOT3O75175 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT3O75175 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CNOT3O75175 AC099343.3-201ENST00000605834 2503 ntBASIC17.31■□□□□ 0.36
CNOT3O75175 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT3O75175 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT3O75175 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CNOT3O75175 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.31■□□□□ 0.36
CNOT3O75175 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT3O75175 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT3O75175 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.3■□□□□ 0.36
CNOT3O75175 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CNOT3O75175 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CNOT3O75175 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.3■□□□□ 0.36
CNOT3O75175 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.3■□□□□ 0.36
CNOT3O75175 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CNOT3O75175 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 AL450487.1-201ENST00000426799 995 ntBASIC17.3■□□□□ 0.36
CNOT3O75175 AP003733.1-201ENST00000491725 852 ntBASIC17.3■□□□□ 0.36
CNOT3O75175 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.3■□□□□ 0.36
CNOT3O75175 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.3■□□□□ 0.36
CNOT3O75175 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.3■□□□□ 0.36
CNOT3O75175 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CNOT3O75175 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.3■□□□□ 0.36
CNOT3O75175 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.3■□□□□ 0.36
CNOT3O75175 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CNOT3O75175 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CNOT3O75175 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.3■□□□□ 0.36
CNOT3O75175 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.3■□□□□ 0.36
CNOT3O75175 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.3■□□□□ 0.36
CNOT3O75175 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT3O75175 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNOT3O75175 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.29■□□□□ 0.36
CNOT3O75175 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNOT3O75175 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNOT3O75175 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.29■□□□□ 0.36
CNOT3O75175 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT3O75175 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms