Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RIPK2O43353 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
RIPK2O43353 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.1■□□□□ 0.49
RIPK2O43353 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RIPK2O43353 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
RIPK2O43353 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.1■□□□□ 0.49
RIPK2O43353 SLC25A1P2-201ENST00000430693 912 ntBASIC18.1■□□□□ 0.49
RIPK2O43353 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.1■□□□□ 0.49
RIPK2O43353 TSPY17P-201ENST00000450329 467 ntBASIC18.1■□□□□ 0.49
RIPK2O43353 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.1■□□□□ 0.49
RIPK2O43353 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.1■□□□□ 0.49
RIPK2O43353 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.1■□□□□ 0.49
RIPK2O43353 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.1■□□□□ 0.49
RIPK2O43353 AL359736.2-201ENST00000621992 437 ntBASIC18.1■□□□□ 0.49
RIPK2O43353 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
RIPK2O43353 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RIPK2O43353 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.1■□□□□ 0.49
RIPK2O43353 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RIPK2O43353 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RIPK2O43353 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.1■□□□□ 0.49
RIPK2O43353 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RIPK2O43353 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RIPK2O43353 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RIPK2O43353 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RIPK2O43353 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.09■□□□□ 0.49
RIPK2O43353 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.09■□□□□ 0.49
RIPK2O43353 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.09■□□□□ 0.49
RIPK2O43353 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RIPK2O43353 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RIPK2O43353 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 DDX43P3-201ENST00000441064 443 ntBASIC18.09■□□□□ 0.49
RIPK2O43353 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.09■□□□□ 0.49
RIPK2O43353 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.09■□□□□ 0.49
RIPK2O43353 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.09■□□□□ 0.49
RIPK2O43353 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.09■□□□□ 0.49
RIPK2O43353 FAM197Y4-202ENST00000622692 608 ntBASIC18.09■□□□□ 0.49
RIPK2O43353 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RIPK2O43353 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RIPK2O43353 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.09■□□□□ 0.49
RIPK2O43353 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RIPK2O43353 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.09■□□□□ 0.49
RIPK2O43353 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.09■□□□□ 0.49
RIPK2O43353 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RIPK2O43353 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RIPK2O43353 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
RIPK2O43353 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
RIPK2O43353 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RIPK2O43353 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RIPK2O43353 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RIPK2O43353 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
RIPK2O43353 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RIPK2O43353 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.08■□□□□ 0.49
RIPK2O43353 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RIPK2O43353 FLJ38576-201ENST00000623820 2459 ntBASIC18.08■□□□□ 0.49
RIPK2O43353 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
RIPK2O43353 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
RIPK2O43353 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.08■□□□□ 0.48
RIPK2O43353 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.08■□□□□ 0.48
RIPK2O43353 KRT18P29-201ENST00000397031 1267 ntBASIC18.08■□□□□ 0.48
RIPK2O43353 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RIPK2O43353 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RIPK2O43353 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.08■□□□□ 0.48
RIPK2O43353 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms