Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PHGDHO43175 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PHGDHO43175 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.75■□□□□ 0.43
PHGDHO43175 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
PHGDHO43175 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
PHGDHO43175 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 SLC25A3P1-201ENST00000443844 931 ntBASIC17.75■□□□□ 0.43
PHGDHO43175 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.75■□□□□ 0.43
PHGDHO43175 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.75■□□□□ 0.43
PHGDHO43175 AC034232.1-201ENST00000506026 1064 ntBASIC17.75■□□□□ 0.43
PHGDHO43175 AC010203.1-204ENST00000548782 407 ntBASIC17.75■□□□□ 0.43
PHGDHO43175 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.75■□□□□ 0.43
PHGDHO43175 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.75■□□□□ 0.43
PHGDHO43175 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PHGDHO43175 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PHGDHO43175 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.75■□□□□ 0.43
PHGDHO43175 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.75■□□□□ 0.43
PHGDHO43175 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.75■□□□□ 0.43
PHGDHO43175 LINC00304-203ENST00000565008 1864 ntBASIC17.75■□□□□ 0.43
PHGDHO43175 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.75■□□□□ 0.43
PHGDHO43175 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PHGDHO43175 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.75■□□□□ 0.43
PHGDHO43175 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHGDHO43175 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PHGDHO43175 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.74■□□□□ 0.43
PHGDHO43175 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.74■□□□□ 0.43
PHGDHO43175 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.74■□□□□ 0.43
PHGDHO43175 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
PHGDHO43175 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 AL023806.1-201ENST00000603994 1649 ntBASIC17.74■□□□□ 0.43
PHGDHO43175 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.74■□□□□ 0.43
PHGDHO43175 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.74■□□□□ 0.43
PHGDHO43175 RASA4DP-201ENST00000460726 1199 ntBASIC17.74■□□□□ 0.43
PHGDHO43175 AC113404.2-201ENST00000507884 177 ntBASIC17.74■□□□□ 0.43
PHGDHO43175 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PHGDHO43175 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.74■□□□□ 0.43
PHGDHO43175 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.74■□□□□ 0.43
PHGDHO43175 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.74■□□□□ 0.43
PHGDHO43175 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 AC024563.2-201ENST00000603282 481 ntBASIC17.74■□□□□ 0.43
PHGDHO43175 AC066615.1-201ENST00000640911 628 ntBASIC17.74■□□□□ 0.43
PHGDHO43175 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PHGDHO43175 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.74■□□□□ 0.43
PHGDHO43175 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PHGDHO43175 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.74■□□□□ 0.43
PHGDHO43175 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PHGDHO43175 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PHGDHO43175 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHGDHO43175 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
PHGDHO43175 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PHGDHO43175 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHGDHO43175 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHGDHO43175 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PHGDHO43175 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHGDHO43175 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PHGDHO43175 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHGDHO43175 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.73■□□□□ 0.43
PHGDHO43175 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHGDHO43175 CROCCP2-202ENST00000412962 2773 ntBASIC17.73■□□□□ 0.43
PHGDHO43175 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHGDHO43175 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.73■□□□□ 0.43
PHGDHO43175 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PHGDHO43175 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.73■□□□□ 0.43
PHGDHO43175 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.73■□□□□ 0.43
PHGDHO43175 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.73■□□□□ 0.43
PHGDHO43175 AL441883.1-201ENST00000566170 1045 ntBASIC17.73■□□□□ 0.43
PHGDHO43175 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.73■□□□□ 0.43
PHGDHO43175 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PHGDHO43175 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PHGDHO43175 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHGDHO43175 AC009053.2-201ENST00000563701 2365 ntBASIC17.73■□□□□ 0.43
PHGDHO43175 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PHGDHO43175 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.72■□□□□ 0.43
PHGDHO43175 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PHGDHO43175 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms