Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TBC1D3FA6NER0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 HLA-J-201ENST00000462773 1622 ntBASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 AL020996.1-203ENST00000536896 2307 ntBASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 AC122714.2-201ENST00000502787 707 ntBASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 AC106730.1-201ENST00000566722 1090 ntBASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TBC1D3FA6NER0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 ZNF259P1-201ENST00000407656 1365 ntBASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 MIR940-201ENST00000401276 94 ntBASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 AC103564.2-201ENST00000432853 1299 ntBASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 KRT18P58-201ENST00000527480 1120 ntBASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 AC093677.2-201ENST00000600169 1863 ntBASIC17.71■□□□□ 0.43
TBC1D3FA6NER0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
TBC1D3FA6NER0 AC135776.1-201ENST00000319817 2481 ntBASIC17.71■□□□□ 0.42
TBC1D3FA6NER0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TBC1D3FA6NER0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TBC1D3FA6NER0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.71■□□□□ 0.42
TBC1D3FA6NER0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 AC092910.1-201ENST00000482027 1129 ntBASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 AC025062.2-201ENST00000605477 670 ntBASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 AC117500.6-201ENST00000624871 588 ntBASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 AL138781.2-201ENST00000617896 1843 ntBASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TBC1D3FA6NER0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.69■□□□□ 0.42
TBC1D3FA6NER0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms