Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 Z83851.2-201ENST00000609564 659 ntBASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.05■□□□□ 0.48
TBC1D3BA6NDS4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 AP002414.3-201ENST00000589352 1468 ntBASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 BX842568.4-201ENST00000421222 227 ntBASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 MED15P5-201ENST00000423150 992 ntBASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 AC073592.5-201ENST00000624854 528 ntBASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 SIRPAP1-201ENST00000448467 1770 ntBASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TBC1D3BA6NDS4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 AC034105.1-201ENST00000563488 319 ntBASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 AC140113.2-201ENST00000604370 208 ntBASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.03■□□□□ 0.48
TBC1D3BA6NDS4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 RNF165-205ENST00000588679 2904 ntBASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TBC1D3BA6NDS4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms