Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC66A2RUB6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 KRT8P50-201ENST00000562022 1438 ntBASIC19.34■□□□□ 0.69
CCDC66A2RUB6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 SLC25A1P4-201ENST00000567977 778 ntBASIC19.34■□□□□ 0.69
CCDC66A2RUB6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 GMCL1P1-201ENST00000463439 1581 ntBASIC19.34■□□□□ 0.69
CCDC66A2RUB6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 FLJ13224-201ENST00000313737 1514 ntBASIC19.34■□□□□ 0.69
CCDC66A2RUB6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC66A2RUB6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CCDC66A2RUB6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 NUDT16P1-203ENST00000513809 620 ntBASIC19.33■□□□□ 0.68
CCDC66A2RUB6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 DOC2GP-204ENST00000639052 2548 ntBASIC19.33■□□□□ 0.68
CCDC66A2RUB6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC66A2RUB6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 LINC00554-201ENST00000564841 3011 ntBASIC19.32■□□□□ 0.68
CCDC66A2RUB6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 AL158047.1-201ENST00000445918 881 ntBASIC19.32■□□□□ 0.68
CCDC66A2RUB6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 AC142381.4-202ENST00000563973 229 ntBASIC19.32■□□□□ 0.68
CCDC66A2RUB6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC66A2RUB6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms