Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 AC034232.1-201ENST00000506026 1064 ntBASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 AC010947.1-201ENST00000623454 693 ntBASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV30A0A087WSZ9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 KRT18P22-201ENST00000402024 1347 ntBASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 CYP2D8P-201ENST00000433633 1490 ntBASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV30A0A087WSZ9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV30A0A087WSZ9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms