Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.44■□□□□ 0.38
CSNK1G3Q9Y6M4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 HLA-J-201ENST00000462773 1622 ntBASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 AL031598.1-201ENST00000561511 1773 ntBASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 AC007967.3-201ENST00000434308 558 ntBASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 AC122714.2-201ENST00000502787 707 ntBASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 OR7E14P-202ENST00000530490 1290 ntBASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 AC145285.3-201ENST00000564603 959 ntBASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CSNK1G3Q9Y6M4 AC005082.1-201ENST00000413042 2259 ntBASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 ESPNP-201ENST00000270691 2015 ntBASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 RPS2P1-201ENST00000434010 821 ntBASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 IGHV3-22-201ENST00000520721 359 ntBASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 PMS2P7-201ENST00000506558 1336 ntBASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CSNK1G3Q9Y6M4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 KRT18P13-201ENST00000400056 1290 ntBASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 NKAPP1-205ENST00000585790 367 ntBASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 TERC-201ENST00000602385 541 ntBASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 AC025062.2-201ENST00000605477 670 ntBASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 AC009113.1-201ENST00000570267 2443 ntBASIC17.41■□□□□ 0.38
CSNK1G3Q9Y6M4 AC022898.2-201ENST00000616822 1312 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms