Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 AC068472.1-201ENST00000474589 881 ntBASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 AC099336.1-202ENST00000602961 463 ntBASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 NSUN5P1-202ENST00000421140 1535 ntBASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 NSUN5P2-203ENST00000457352 1529 ntBASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A3BPQ9Y5P4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
COL4A3BPQ9Y5P4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 TSPY19P-201ENST00000418461 509 ntBASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 TSPY18P-201ENST00000441642 509 ntBASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 AC111152.3-201ENST00000569699 673 ntBASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 AC138894.3-201ENST00000603787 634 ntBASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 AL732292.2-201ENST00000609649 430 ntBASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 KRT18P55-202ENST00000578578 1546 ntBASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.95■□□□□ 0.78
COL4A3BPQ9Y5P4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 AL121772.3-201ENST00000610840 674 ntBASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 AC134043.2-201ENST00000624206 2238 ntBASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.94■□□□□ 0.78
COL4A3BPQ9Y5P4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms