Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AL353692.3-201ENST00000407031 1396 ntBASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB11Q9Y5F2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 LINC00167-201ENST00000530583 1419 ntBASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 AC064862.7-201ENST00000604520 867 ntBASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 AC233702.3-201ENST00000578656 1387 ntBASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB11Q9Y5F2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 AC067852.2-201ENST00000590513 2313 ntBASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 LINC00602-201ENST00000629776 2065 ntBASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 AP002469.2-201ENST00000531724 424 ntBASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 AL592071.1-201ENST00000611956 408 ntBASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB11Q9Y5F2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PCDHB11Q9Y5F2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms