Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 LIN28AP1-201ENST00000429574 405 ntBASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 AC010203.1-204ENST00000548782 407 ntBASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.66■□□□□ 0.1
RHBDD3Q9Y3P4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 ATP5G1P1-201ENST00000448724 379 ntBASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 GCSHP2-201ENST00000560971 527 ntBASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 AL157888.1-201ENST00000631930 593 ntBASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RHBDD3Q9Y3P4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
RHBDD3Q9Y3P4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.1
RHBDD3Q9Y3P4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.64■□□□□ 0.09
RHBDD3Q9Y3P4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms