Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 ELK2BP-201ENST00000415014 1224 ntBASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 AC002347.1-201ENST00000569543 541 ntBASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 MIR3687-2-201ENST00000577708 61 ntBASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 MIR3687-1-201ENST00000614492 61 ntBASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 AC100803.2-201ENST00000562459 1963 ntBASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 AC135776.1-201ENST00000319817 2481 ntBASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LEMD3Q9Y2U8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 STK25P1-201ENST00000585406 838 ntBASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LEMD3Q9Y2U8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 BX323043.1-201ENST00000641006 1765 ntBASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.53■■□□□ 1.04
LEMD3Q9Y2U8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 AC023274.1-201ENST00000418278 595 ntBASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 KRT18P2-201ENST00000447938 1258 ntBASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.52■■□□□ 1.04
LEMD3Q9Y2U8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms