Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RIMS3Q9UJD0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RIMS3Q9UJD0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.92■□□□□ 0.3
RIMS3Q9UJD0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIMS3Q9UJD0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.92■□□□□ 0.3
RIMS3Q9UJD0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RIMS3Q9UJD0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RIMS3Q9UJD0 AL596257.1-201ENST00000641463 2694 ntBASIC16.92■□□□□ 0.3
RIMS3Q9UJD0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIMS3Q9UJD0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIMS3Q9UJD0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 TSPY20P-201ENST00000450910 630 ntBASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 CA15P1-201ENST00000481698 905 ntBASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 AC142381.4-202ENST00000563973 229 ntBASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 LINC02199-201ENST00000506655 2702 ntBASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 HLA-J-201ENST00000462773 1622 ntBASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 AC100803.2-201ENST00000562459 1963 ntBASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 AC060834.1-201ENST00000443027 2032 ntBASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIMS3Q9UJD0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 AC009102.3-201ENST00000623118 1491 ntBASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIMS3Q9UJD0 AL603756.1-201ENST00000606511 2163 ntBASIC16.89■□□□□ 0.3
RIMS3Q9UJD0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RIMS3Q9UJD0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 PRORSD1P-201ENST00000295112 541 ntBASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 RPS2P55-201ENST00000397318 883 ntBASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 AC107956.1-201ENST00000494359 873 ntBASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIMS3Q9UJD0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms