Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.17■□□□□ 0.5
EBF1Q9UH73 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF1Q9UH73 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.17■□□□□ 0.5
EBF1Q9UH73 AC005104.2-201ENST00000427818 678 ntBASIC18.17■□□□□ 0.5
EBF1Q9UH73 FAM197Y3-203ENST00000618346 717 ntBASIC18.17■□□□□ 0.5
EBF1Q9UH73 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF1Q9UH73 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
EBF1Q9UH73 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF1Q9UH73 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF1Q9UH73 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF1Q9UH73 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF1Q9UH73 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF1Q9UH73 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EBF1Q9UH73 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
EBF1Q9UH73 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.16■□□□□ 0.5
EBF1Q9UH73 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.16■□□□□ 0.5
EBF1Q9UH73 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.16■□□□□ 0.5
EBF1Q9UH73 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 AL591424.1-201ENST00000442569 1213 ntBASIC18.16■□□□□ 0.5
EBF1Q9UH73 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.16■□□□□ 0.5
EBF1Q9UH73 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.16■□□□□ 0.5
EBF1Q9UH73 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.16■□□□□ 0.5
EBF1Q9UH73 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.16■□□□□ 0.5
EBF1Q9UH73 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.16■□□□□ 0.5
EBF1Q9UH73 AC106820.2-201ENST00000563775 3264 ntBASIC18.16■□□□□ 0.5
EBF1Q9UH73 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.16■□□□□ 0.5
EBF1Q9UH73 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.16■□□□□ 0.5
EBF1Q9UH73 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
EBF1Q9UH73 HLA-J-201ENST00000462773 1622 ntBASIC18.16■□□□□ 0.5
EBF1Q9UH73 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EBF1Q9UH73 LINC01126-201ENST00000623515 1646 ntBASIC18.16■□□□□ 0.5
EBF1Q9UH73 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 LINC00602-201ENST00000629776 2065 ntBASIC18.15■□□□□ 0.5
EBF1Q9UH73 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EBF1Q9UH73 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
EBF1Q9UH73 AC104109.2-201ENST00000602919 1418 ntBASIC18.15■□□□□ 0.5
EBF1Q9UH73 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
EBF1Q9UH73 AC012313.1-201ENST00000593393 3059 ntBASIC18.14■□□□□ 0.5
EBF1Q9UH73 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
EBF1Q9UH73 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF1Q9UH73 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EBF1Q9UH73 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF1Q9UH73 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF1Q9UH73 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF1Q9UH73 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
EBF1Q9UH73 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF1Q9UH73 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.14■□□□□ 0.49
EBF1Q9UH73 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.14■□□□□ 0.49
EBF1Q9UH73 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.14■□□□□ 0.49
EBF1Q9UH73 SART3-203ENST00000546611 1184 ntBASIC18.14■□□□□ 0.49
EBF1Q9UH73 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.14■□□□□ 0.49
EBF1Q9UH73 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF1Q9UH73 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.14■□□□□ 0.49
EBF1Q9UH73 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF1Q9UH73 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.14■□□□□ 0.49
EBF1Q9UH73 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EBF1Q9UH73 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EBF1Q9UH73 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
EBF1Q9UH73 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EBF1Q9UH73 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms