Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 AC092865.7-201ENST00000641832 219 ntBASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 AC141257.4-201ENST00000634557 245 ntBASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 AC136944.6-201ENST00000634818 245 ntBASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.85□□□□□ -0.03
LIN7CQ9NUP9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 AC073508.3-201ENST00000619697 1419 ntBASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 BX664615.1-201ENST00000443558 458 ntBASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 MIR3180-4-201ENST00000582223 153 ntBASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 AL138966.2-201ENST00000621997 464 ntBASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 AL031432.5-201ENST00000641059 760 ntBASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.84□□□□□ -0.03
LIN7CQ9NUP9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms