Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC007967.3-201ENST00000434308 558 ntBASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 AC005104.2-201ENST00000427818 678 ntBASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 AC069148.1-201ENST00000608741 768 ntBASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 BX276092.7-203ENST00000637198 1536 ntBASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.81■□□□□ 0.76
BLOC1S4Q9NUP1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 HLA-J-201ENST00000462773 1622 ntBASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 COX5BP2-201ENST00000392354 334 ntBASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 ATP5G2P1-201ENST00000433580 426 ntBASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 LINC01451-201ENST00000623792 534 ntBASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
BLOC1S4Q9NUP1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 TOB2P1-201ENST00000469761 992 ntBASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
BLOC1S4Q9NUP1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms