Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CISHQ9NSE2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.03■□□□□ 0.64
CISHQ9NSE2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CISHQ9NSE2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CISHQ9NSE2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.03■□□□□ 0.64
CISHQ9NSE2 DDX43P3-201ENST00000441064 443 ntBASIC19.03■□□□□ 0.64
CISHQ9NSE2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.03■□□□□ 0.64
CISHQ9NSE2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.03■□□□□ 0.64
CISHQ9NSE2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.03■□□□□ 0.64
CISHQ9NSE2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.03■□□□□ 0.64
CISHQ9NSE2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.03■□□□□ 0.64
CISHQ9NSE2 AL138831.2-201ENST00000606564 490 ntBASIC19.03■□□□□ 0.64
CISHQ9NSE2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CISHQ9NSE2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 GNAS-203ENST00000306120 1878 ntBASIC19.03■□□□□ 0.64
CISHQ9NSE2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CISHQ9NSE2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.03■□□□□ 0.64
CISHQ9NSE2 AC097374.2-201ENST00000618617 1306 ntBASIC19.02■□□□□ 0.64
CISHQ9NSE2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CISHQ9NSE2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CISHQ9NSE2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CISHQ9NSE2 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.02■□□□□ 0.64
CISHQ9NSE2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CISHQ9NSE2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 Z69720.1-201ENST00000601483 472 ntBASIC19.02■□□□□ 0.64
CISHQ9NSE2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CISHQ9NSE2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CISHQ9NSE2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CISHQ9NSE2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.02■□□□□ 0.64
CISHQ9NSE2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CISHQ9NSE2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CISHQ9NSE2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CISHQ9NSE2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CISHQ9NSE2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CISHQ9NSE2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 KRT17P6-201ENST00000453795 1220 ntBASIC19.01■□□□□ 0.63
CISHQ9NSE2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 AP000867.3-201ENST00000524675 377 ntBASIC19.01■□□□□ 0.63
CISHQ9NSE2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 AC010460.3-201ENST00000511359 1579 ntBASIC19.01■□□□□ 0.63
CISHQ9NSE2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CISHQ9NSE2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CISHQ9NSE2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19■□□□□ 0.63
CISHQ9NSE2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CISHQ9NSE2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CISHQ9NSE2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
CISHQ9NSE2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms