Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.93■□□□□ 0.78
CBX8Q9HC52 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.93■□□□□ 0.78
CBX8Q9HC52 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.93■□□□□ 0.78
CBX8Q9HC52 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX8Q9HC52 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CBX8Q9HC52 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CBX8Q9HC52 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX8Q9HC52 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX8Q9HC52 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX8Q9HC52 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CBX8Q9HC52 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CBX8Q9HC52 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.93■□□□□ 0.78
CBX8Q9HC52 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CBX8Q9HC52 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX8Q9HC52 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CBX8Q9HC52 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX8Q9HC52 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX8Q9HC52 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CBX8Q9HC52 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 AL353719.1-201ENST00000566847 864 ntBASIC19.92■□□□□ 0.78
CBX8Q9HC52 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 REXO1L10P-201ENST00000615707 1290 ntBASIC19.92■□□□□ 0.78
CBX8Q9HC52 REXO1L12P-201ENST00000622156 912 ntBASIC19.92■□□□□ 0.78
CBX8Q9HC52 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX8Q9HC52 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX8Q9HC52 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CBX8Q9HC52 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX8Q9HC52 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX8Q9HC52 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBX8Q9HC52 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CBX8Q9HC52 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 AL139384.1-201ENST00000612143 3047 ntBASIC19.91■□□□□ 0.78
CBX8Q9HC52 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 FLJ38576-201ENST00000623820 2459 ntBASIC19.91■□□□□ 0.78
CBX8Q9HC52 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 AL359736.2-201ENST00000621992 437 ntBASIC19.91■□□□□ 0.78
CBX8Q9HC52 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.91■□□□□ 0.78
CBX8Q9HC52 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBX8Q9HC52 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX8Q9HC52 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.9■□□□□ 0.78
CBX8Q9HC52 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.9■□□□□ 0.78
CBX8Q9HC52 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX8Q9HC52 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.9■□□□□ 0.78
CBX8Q9HC52 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.9■□□□□ 0.78
CBX8Q9HC52 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX8Q9HC52 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX8Q9HC52 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CBX8Q9HC52 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CBX8Q9HC52 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX8Q9HC52 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBX8Q9HC52 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CBX8Q9HC52 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.9■□□□□ 0.78
CBX8Q9HC52 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms