Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 SEC1P-202ENST00000473944 940 ntBASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 AL118508.1-201ENST00000613502 2345 ntBASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 AL162727.3-201ENST00000635661 2787 ntBASIC17.22■□□□□ 0.35
LIN28AQ9H9Z2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 AL031133.1-201ENST00000406807 723 ntBASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 AC112907.2-201ENST00000448639 330 ntBASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 HOMER2P1-201ENST00000455653 964 ntBASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 LINC01238-205ENST00000567549 1107 ntBASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 PP12613-201ENST00000424958 2230 ntBASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 AC034236.2-201ENST00000606662 1610 ntBASIC17.21■□□□□ 0.35
LIN28AQ9H9Z2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
LIN28AQ9H9Z2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
LIN28AQ9H9Z2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
LIN28AQ9H9Z2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 AC092597.1-201ENST00000487352 616 ntBASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.2■□□□□ 0.34
LIN28AQ9H9Z2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LIN28AQ9H9Z2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.19■□□□□ 0.34
LIN28AQ9H9Z2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms