Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SH2D4AQ9H788 AC010460.3-201ENST00000511359 1579 ntBASIC20.76■□□□□ 0.91
SH2D4AQ9H788 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 HLA-J-201ENST00000462773 1622 ntBASIC20.75■□□□□ 0.91
SH2D4AQ9H788 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 RPS2P1-201ENST00000434010 821 ntBASIC20.75■□□□□ 0.91
SH2D4AQ9H788 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 SLC25A1P1-201ENST00000528351 927 ntBASIC20.75■□□□□ 0.91
SH2D4AQ9H788 NKAPP1-205ENST00000585790 367 ntBASIC20.75■□□□□ 0.91
SH2D4AQ9H788 AC023511.2-201ENST00000618803 211 ntBASIC20.75■□□□□ 0.91
SH2D4AQ9H788 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SH2D4AQ9H788 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 KRT18P58-201ENST00000527480 1120 ntBASIC20.74■□□□□ 0.91
SH2D4AQ9H788 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 AC025062.2-201ENST00000605477 670 ntBASIC20.74■□□□□ 0.91
SH2D4AQ9H788 AC116407.3-201ENST00000623905 1129 ntBASIC20.74■□□□□ 0.91
SH2D4AQ9H788 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH2D4AQ9H788 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 PMPCAP1-201ENST00000508114 1576 ntBASIC20.73■□□□□ 0.91
SH2D4AQ9H788 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 MIR574-201ENST00000385209 96 ntBASIC20.73■□□□□ 0.91
SH2D4AQ9H788 COX5BP2-201ENST00000392354 334 ntBASIC20.73■□□□□ 0.91
SH2D4AQ9H788 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 AC106730.1-201ENST00000566722 1090 ntBASIC20.73■□□□□ 0.91
SH2D4AQ9H788 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 MTDHP4-201ENST00000600287 670 ntBASIC20.73■□□□□ 0.91
SH2D4AQ9H788 AC116407.2-201ENST00000613639 860 ntBASIC20.73■□□□□ 0.91
SH2D4AQ9H788 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 AL096828.2-201ENST00000567259 1965 ntBASIC20.73■□□□□ 0.91
SH2D4AQ9H788 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH2D4AQ9H788 ZNF259P1-201ENST00000407656 1365 ntBASIC20.72■□□□□ 0.91
SH2D4AQ9H788 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 AC079776.2-201ENST00000641154 1609 ntBASIC20.72■□□□□ 0.91
SH2D4AQ9H788 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms